| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2787742 = | 424 (1.200) | 27 (0.090) | 10/96 | NT | 7.7% | coding (131/1401 nt) | gabP | gamma‑aminobutyrate transporter |
| ? | CP009273 | 2787778 = | 287 (0.950) | coding (167/1401 nt) | gabP | gamma‑aminobutyrate transporter | |||||
CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2787816‑2787742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT > CP009273/2787778‑2787843 CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC > 1:9417070/1‑68 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:28284048/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC < 1:7028153/67‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC < 1:13084934/67‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:23394440/68‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:21683858/68‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:4488488/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:10503604/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:16000781/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:4116574/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:17458684/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:842007/68‑1 CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC < 1:27708917/68‑1 CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG > 1:22605994/1‑67 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:17272761/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:20669122/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:19136999/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:27023007/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC < 1:23873884/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC < 1:23908308/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC < 1:5332446/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC < 1:24971927/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:5120837/67‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:23589891/67‑1 AACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACT < 1:13437275/68‑1 ATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGT < 1:27567163/68‑1 ATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGT < 1:26761135/68‑1 TCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTG < 1:1026574/68‑1 CCGCATAATCATACCCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:28614403/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:19592108/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:11341298/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:4687609/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:12767509/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:26556532/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:26527127/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:25441516/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:2524077/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:20721413/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:21090917/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:16479808/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:2218094/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGAAATACCGCCGGGCTACTGGTGG < 1:28670157/68‑1 CCGCATAATCAAACCCACCCGTAGCCCGGCGAACAGATAGGCCAGTAATCCCGCCGGGATACTGGTGG < 1:5601713/68‑1 CCGCATAATCAAAACCACCAGTAGCCCGGCTAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:27243958/68‑1 TAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG < 1:27885070/68‑1 AATCATAACCCCCAGTAGCCCGGCGCACAGATAGGCCCGTAATACCGCCGGGCTACTGGTGGTTATGA < 1:9313483/68‑1 ATAACCCCCCGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTAT < 1:16249888/68‑1 CACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGA < 1:11876653/68‑1 GGCGAACAGCTAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAA < 1:1477952/68‑1 GGCGAACACATAGGCCAGAAAAACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAA < 1:9592631/68‑1 CGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATG > 1:22862360/1‑68 CAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGC < 1:28905918/68‑1 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:18289090/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:26284516/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:10992997/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:4352387/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:10959513/1‑68 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG < 1:5970421/68‑1 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG < 1:9623792/68‑1 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG > 1:14021657/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:14997791/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:20848266/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:1636740/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:8474872/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:3405095/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:629343/1‑68 CCGGGCTACTGGTGGTTATCATTATGCGGATGTACGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:9126363/1‑68 GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC > 1:11247928/1‑68 GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC > 1:7572759/1‑68 GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC > 1:16943067/1‑68 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:2616923/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:23092360/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:20647585/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:8973265/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:25300882/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:28336839/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:24081736/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:28810295/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCCGTTGCCACGCCCGATACCGGTTCGT < 1:17033222/67‑1 CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2787816‑2787742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT > CP009273/2787778‑2787843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |