| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 204 (0.580) | 15 (0.050) | 6/96 | NT | 7.2% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 211 (0.700) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215274‑3215338 CCACCGCATGGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:5571152/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTGGGTCAACGCGCTG > 1:19562243/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:10129674/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:20612898/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:22410430/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:235219/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:24815248/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:18010346/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:24861882/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:25889093/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:26602133/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:28280117/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:28977577/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:4295043/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14417513/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:6797022/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:8531131/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:9357072/1‑68 CACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCCACGCGCTG > 1:9048859/1‑67 ACCGCATCGTAACCGCTGCCGGGTTCGTGATAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:27447534/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:14692804/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:4807153/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:5055003/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:8590408/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:9816702/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:10298594/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:11662238/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:5880169/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:22685219/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:1427742/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:12844634/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:24788672/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:14686436/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:29189095/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:19374055/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:27259215/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:22740854/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGG < 1:14164540/68‑1 ATCGTAACCGCTCCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACCCGCTGGCAGCGG < 1:14004889/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGCTAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:24746916/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:6853755/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:822949/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:8723978/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:5993226/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:26276787/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:25872468/68‑1 AACCTCTGCCGGGTTCGTGAAAGTCGATAAACCAGATCTTGTCGGTCAACGCGCGGGCAGCGGTTAC < 1:24676804/67‑1 AACCGCTGCCCGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTAC < 1:6464525/67‑1 CCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:25088762/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:21735672/68‑1 GCCGGGTTCGTCAAAGTCGATAAAACACATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:17587305/68‑1 GCCGGGTTCGGGAACGGCGATAAAACAGATATTGGCGGGCACCGCGCTGGCAGCGGTTACGATGCGGT < 1:13921195/68‑1 GCCGGGTGCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:15587238/68‑1 GCCGGGTGCGTGAAACTCGATAAAACACATACTGGCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:18958083/68‑1 CGGGTTCGTGAACGTCGATAAACCCGATATTGGCGGGCCACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:29175242/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:16012440/68‑1 CGGGTTCGTCAACGTCGATAAAACACAAATTGTCGGTCAACCCGCCGGCAGCGGTTACGATGCGGTGG < 1:21756121/68‑1 CGGGCTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTCGCAGCGGTTACGATGCGGTGG < 1:25276443/68‑1 gtgCGTGAAAGGCGATAAAACAGATATTGCCGGGCAACGCGCGGGCAGCGGTTACGATGCGGTGGAT < 1:2662159/64‑1 GTGAAAGTCGATAAAACAGATATTGTCGGCCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATCGA < 1:28404618/68‑1 GTGAAAGGCGATAAAACAGATCTTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATCGA < 1:14179003/68‑1 GTGAAACTCGATACAACAGATATTGTCGGGCAACGCGCGGGCAGCGGTTACGATGCGGTGGATATCGA < 1:3921693/68‑1 cAAAGTCGATAAAACACATATTGTCGGCCAACGCGCTGGCAGCGGTTACGATGCGGTGTATATCGAT < 1:23781898/66‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:15268121/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:22342225/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:23969844/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:22307748/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:5052170/68‑1 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:22623829/1‑68 CAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:24061867/1‑68 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:23766150/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:6565594/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:21992991/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:2931998/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:28794920/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:1191569/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:17948754/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:22828614/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:23421820/67‑1 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:15625915/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:19128971/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:21712957/1‑67 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC < 1:3648968/67‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:3331295/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:18879494/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:5925230/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:7049177/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:5376732/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:13903989/65‑1 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215274‑3215338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |