| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 204 (0.580) | 15 (0.050) | 6/96 | NT | 7.2% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 211 (0.700) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 292 total aligned reads displayed.
GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 | gCTTACCAGACATTAAAAACGTCCCCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:22227794/1‑68 (MQ=255) ggttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:3648968‑M1/2‑1 (MQ=255) cTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc < 1:22001692/67‑1 (MQ=255) cTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc < 1:18031990/67‑1 (MQ=255) ttACCAGACATTAAACCCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:11959614/1‑66 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgccgc < 1:7382821/68‑1 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:5925230‑M1/2‑1 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGc > 1:19128971‑M1/64‑67 (MQ=255) tACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt < 1:20767571/68‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:22828614‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTg > 1:24061867‑M1/63‑68 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:8180038/1‑67 (MQ=255) gatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGc > 1:22623829‑M1/62‑68 (MQ=255) ccAGACATTAAAACCGGCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGc < 1:7136326/68‑1 (MQ=255) atatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGcc < 1:5052170‑M1/8‑1 (MQ=255) atatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGcc < 1:15268121‑M1/8‑1 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:17724741/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:21373777/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:20408127/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:16604892/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:27394463/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:685402/1‑68 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcg < 1:15454132/68‑1 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:21583996/1‑67 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:11099881/1‑67 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAg < 1:16317147/66‑1 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc < 1:29251701/68‑1 (MQ=255) ttAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGcgcg < 1:4339384/68‑1 (MQ=255) ttAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGcgcg > 1:3038861/1‑68 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:7590326/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:7690687/68‑1 (MQ=255) aaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:12606158/1‑68 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:16103564/1‑67 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:28587906/1‑67 (MQ=255) aaaCGTCACCGGTATTTTAATTGTAGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:23323152/1‑67 (MQ=255) aaaCGTCACAGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:27764212/68‑1 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:10117344/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGAc < 1:6012062/68‑1 (MQ=255) aCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGAcc < 1:21665600/68‑1 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:3381073/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:16466005/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg < 1:636743/68‑1 (MQ=255) cGTCACCGGGATTTTAAATGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg < 1:18830965/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:27268042/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:24445351/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:17153970/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:8901871/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:13460622/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:2032177/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:23645917/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:11657185/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:28857676/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:5637593/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:5278421/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:2485043/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:4877028/68‑1 (MQ=255) ggTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata > 1:2289993/1‑67 (MQ=255) ggTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata > 1:23411000/1‑67 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:1593929/68‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:3267138/68‑1 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCCGCGCGTTGACCGACAATATCTGTTTTa > 1:9811756/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:1038050/1‑68 (MQ=255) aTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAt < 1:13919381/68‑1 (MQ=255) ttGTCGGCAAACCCACGCCCGGCCGGCGCGCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATc > 1:6348593/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:12096165/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:13829733/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:14949638/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:15757342/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:18643221/1‑67 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:11257154/1‑68 (MQ=255) gTCCGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGa < 1:2952780/68‑1 (MQ=255) cAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACttt < 1:27011138/67‑1 (MQ=255) cAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACttt < 1:4038586/67‑1 (MQ=255) atcgatatacaccgcatcgtaaCCGCTGCCAGCGCGTTGGCCGACAATATGTGTTTTATCGActttg < 1:23781898‑M1/45‑2 (MQ=255) aaaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCa < 1:12341970/68‑1 (MQ=255) tcgatatccaccgcatcgtaaCCGCTGCCCGCGCGTTGCCCGACAATATCTGTTGTATCGAGTTTCAc < 1:3921693‑M1/47‑1 (MQ=255) tcgatatccaccgcatcgtaaCCGCTGCCAGCGCGTTGGCCGACAATATCTGTTTTATCGACTTTCAc < 1:28404618‑M1/47‑1 (MQ=255) tcgatatccaccgcatcgtaaCCGCTGCCAGCGCGTTGACCGACAAGATCTGTTTTATCGCCTTTCAc < 1:14179003‑M1/47‑1 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg > 1:19719302/1‑67 (MQ=255) ccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGc > 1:9506526/1‑68 (MQ=255) accgcatcgtaaCCGCTGCCAGCGCGTTGACCGCCAGTATGTGTTTTATCGAGTTTCACGCACCCGGc < 1:18958083‑M1/56‑1 (MQ=255) ccgcatcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCa < 1:21735672‑M1/57‑1 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:5778418/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:14307885/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:2537739/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:1994695/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTGGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg < 1:17442785/68‑1 (MQ=255) atcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCgg < 1:25088762‑M1/61‑1 (MQ=255) tgggcgcAGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:28246898/65‑1 (MQ=255) tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:17242108/68‑1 (MQ=255) gcgcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCggcg < 1:13182188/68‑3 (MQ=255) gtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCGGGCAGCGGtt < 1:6464525‑M1/63‑1 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:20622392/1‑68 (MQ=255) cgccgcTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACg > 1:8596540/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:8723978‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:25872468‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:26276787‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAGCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:24746916‑M1/67‑1 (MQ=255) CCGCTGCCAGCGGGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGGAGCGGTTACGAt < 1:14004889‑M1/68‑1 (MQ=255) CCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:12844634‑M1/68‑1 (MQ=255) | GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |