| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 204 (0.580) | 15 (0.050) | 6/96 | NT | 7.2% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 211 (0.700) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 362 total aligned reads displayed.
TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 | tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:25872468‑M2/1‑1 (MQ=255)tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:8723978‑M2/1‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:9618133/68‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:26168526/68‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:17242108/68‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt > 1:20941457/1‑68 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:20622392/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:6853755‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:5993226‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAGCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:24746916‑M1/67‑1 (MQ=255) ccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGAt < 1:25088762‑M2/7‑1 (MQ=255) CCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:12844634‑M1/68‑1 (MQ=255) GCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGc < 1:5880169‑M1/68‑1 (MQ=255) tgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGATGCgg < 1:21735672‑M2/11‑1 (MQ=255) gccgggttcgtcaaagtcgataaaacacatattgtcggtcaacgcgctggcagcggTTACGATGCGGt < 1:17587305‑M2/12‑1 (MQ=255) gccgggttcgggaacggcgataaaacagatattggcgggcaccgcgctggcagcggTTACGATGCGGt < 1:13921195‑M2/12‑1 (MQ=255) gccgggtgcgtgaaagtcgataaaacagatattgtcgggcaacgcgctggcagcggTTACGATGCGGt < 1:15587238‑M2/12‑1 (MQ=255) cgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGATGCGGTgg < 1:16012440‑M2/14‑1 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:26602133‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:28280117‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:4295043‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:8531131‑M1/1‑68 (MQ=255) CAGCGCGTTGACCCACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:19562243‑M1/1‑68 (MQ=255) CAGCGCGTGGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTg > 1:9048859‑M1/1‑67 (MQ=255) gcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGTat < 1:8674799/66‑1 (MQ=255) gcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGat < 1:21572388/66‑1 (MQ=255) gcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATCCGGTGGata > 1:10559309/1‑67 (MQ=255) cgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATc > 1:20233875/1‑68 (MQ=255) gtgaaagtcgataaaacagatattgtcggccaacgcgctggcagcggTTACGATGCGGTGGATATCGa < 1:28404618‑M2/21‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:22720449/68‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:11162719/68‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:28940160/68‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:25616807/68‑1 (MQ=255) aaTATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCAc > 1:13113642/1‑67 (MQ=255) aaTATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCAc > 1:23371552/1‑67 (MQ=255) aaTATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCAc > 1:14765774/1‑67 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa > 1:7764782/1‑68 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:23888986/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:10288849/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:1189344/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:19881672/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:16586811/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:14593251/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:11539640/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:15109977/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:2697129/68‑1 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGTAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:1628603/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:11435360/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:14054928/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:25916052/1‑68 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:9249943/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:7967687/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:7400005/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:14455423/68‑1 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:5571439/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:19373627/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:28840999/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:21853678/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:18790728/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:13320752/1‑68 (MQ=255) ttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaaa > 1:24046430/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:14207656/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:24560631/1‑68 (MQ=255) gACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAat < 1:14888130/68‑1 (MQ=255) aCTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAatc > 1:12468180/1‑68 (MQ=255) tttCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAatcat < 1:4584967/68‑1 (MQ=255) cACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGa < 1:2744084/68‑1 (MQ=255) cACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGa < 1:18139082/68‑1 (MQ=255) cGAACGCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:21410151/68‑1 (MQ=255) cGAACCCTGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:24432443/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCTGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:21263483/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:22167496/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt > 1:23094180/1‑68 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:5276401/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:12669819/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:3837874/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:18302867/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:11612082/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:23533525/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:10765898/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:24860815/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:15348971/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCAGCAGTAAAGAAATCATCGACt < 1:13594125/68‑1 (MQ=255) gAACCCCGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACtt < 1:22937662/68‑1 (MQ=255) aCCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCt > 1:547371/1‑68 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:2627495/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:28048316/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:10051909/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACCCATCAGTAAAGAAATCATCGACTTCtat < 1:6344320/68‑1 (MQ=255) ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTatat < 1:5052170‑M2/60‑1 (MQ=255) ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTatat < 1:22342225‑M2/60‑1 (MQ=255) gcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATc > 1:22623829‑M2/8‑68 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:6565594‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:2931998‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:23421820‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:17948754‑M2/6‑67 (MQ=255) gcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa > 1:19128971‑M2/5‑67 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa < 1:7049177‑M2/63‑1 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAcc < 1:3648968‑M2/65‑1 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAc < 1:3331295‑M2/64‑1 (MQ=255) | TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |