| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3060669 = | 345 (0.980) | 12 (0.040) | 9/92 | NT | 5.0% | intergenic (‑137/+30) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein |
| ? | CP009273 | 3060693 = | 170 (0.590) | intergenic (‑161/+6) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein | |||||
Only 100 of 454 total aligned reads displayed.
ATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCA > CP009273/3060603‑3060736 | gtggtcttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTa < 1:17179829‑M1/2‑1 (MQ=255)gtggtcttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTa < 1:25624895‑M1/2‑1 (MQ=255)gtggtcttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTa < 1:18725995‑M1/2‑1 (MQ=255)gtggtcttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTa < 1:11385775‑M1/2‑1 (MQ=255)aTAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTa > 1:19669452/1‑68 (MQ=255)aTAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTa > 1:8428531/1‑68 (MQ=255) ggtcttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTAg > 1:1119639‑M1/65‑67 (MQ=255) aGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGc < 1:2447069/68‑1 (MQ=255) ggTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGc > 1:1652620/1‑67 (MQ=255) gTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGccc > 1:6866503/1‑68 (MQ=255) tGATTACGTCATGGTTTTACAGAAATTTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:8172097/1‑68 (MQ=255) tGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGccc < 1:13817210/67‑1 (MQ=255) ttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTAGCCcga > 1:25801314‑M1/61‑68 (MQ=255) ttccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTAGCCcga > 1:20022245‑M1/61‑68 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcga < 1:356791/68‑1 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:4941976/1‑67 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:4743836/1‑67 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:77895/1‑67 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:27607380/1‑67 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:26721112/1‑67 (MQ=255) gATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcg > 1:21424397/1‑67 (MQ=255) ccagttagaacctgtggatcaacaacccgctaaaacacctgcagcacaataatatttgTAGCCcgacg > 1:28445455‑M1/59‑68 (MQ=255) tACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcgacga < 1:2539227/68‑1 (MQ=255) tACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCcgacga < 1:17332719/68‑1 (MQ=255) aCGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGaa > 1:3337164/1‑68 (MQ=255) aCGGCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGaa > 1:6396006/1‑68 (MQ=255) cGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAAt > 1:20214840/1‑68 (MQ=255) ggTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCg > 1:12337030/1‑68 (MQ=255) gTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCgg > 1:10914522/1‑68 (MQ=255) ttttACATAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCgg < 1:17587557/67‑1 (MQ=255) ttttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCgg > 1:9776453/1‑67 (MQ=255) ttttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCgg < 1:13276510/67‑1 (MQ=255) tttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCggg < 1:16653517/67‑1 (MQ=255) tttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCggg < 1:29042354/67‑1 (MQ=255) tttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGc < 1:5260122/68‑1 (MQ=255) tttACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGc < 1:10354073/68‑1 (MQ=255) ttacagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCt < 1:205798/68‑1 (MQ=255) tacagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTa < 1:6025227/68‑1 (MQ=255) tacagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTa < 1:27050436/68‑1 (MQ=255) acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:6282042/68‑1 (MQ=255) acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc > 1:17646042/1‑68 (MQ=255) acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:1267029/68‑1 (MQ=255) acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc > 1:5928239/1‑68 (MQ=255) acagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTAc < 1:7641110/68‑1 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:10580551/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:8676497/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:16938593/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:21202836/1‑68 (MQ=255) agaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa > 1:892931/1‑68 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:1530923/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:15122747/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa < 1:14228424/65‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACa < 1:18437495/64‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACa < 1:2500654/64‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:22111778/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:22279527/67‑1 (MQ=255) aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAat < 1:13557804/67‑1 (MQ=255) aattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCcgac < 1:19127047/46‑1 (MQ=255) attacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatt < 1:24228913/68‑1 (MQ=255) acagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATattttt > 1:18935007/1‑68 (MQ=255) acagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATattatt > 1:2358587/1‑68 (MQ=255) agaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt > 1:16254794/1‑68 (MQ=255) aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt > 1:28667935/1‑65 (MQ=255) aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgc < 1:5743494/67‑1 (MQ=255) aaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctgc < 1:18095987/68‑1 (MQ=255) aaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctgc < 1:3485241/68‑1 (MQ=255) aaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctgc < 1:3013773/68‑1 (MQ=255) ggaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAg > 1:8818113/1‑68 (MQ=255) acacctgcagcacaataatatttgTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAg < 1:24151192‑M1/44‑1 (MQ=255) gaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAgg > 1:10649073/1‑68 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgtg > 1:11577224/1‑68 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:15935761/67‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:19857705/67‑1 (MQ=255) ggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgt < 1:9238297/67‑1 (MQ=255) cAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgtgt < 1:21679638/67‑1 (MQ=255) tatCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTa > 1:3946628/1‑68 (MQ=255) atCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTa > 1:28899857/1‑67 (MQ=255) atCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTa > 1:22503091/1‑67 (MQ=255) cGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTCTGCTGCAGGTGTTTTAGCg > 1:28057647/1‑68 (MQ=255) aataatatttgTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:11698361‑M1/57‑1 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATattatt > 1:21899012/1‑45 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:4563026/67‑1 (MQ=255) gTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCggg < 1:25541362/67‑1 (MQ=255) aaaGGCATTAGGCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgtt < 1:2321776/67‑1 (MQ=255) aaaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttg > 1:430899/1‑68 (MQ=255) aaaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgtt < 1:7280733/67‑1 (MQ=255) aaaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgtt < 1:26051093/67‑1 (MQ=255) ggCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGttgttg > 1:12083769/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa > 1:8003870/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa > 1:14387032/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa > 1:27926181/1‑68 (MQ=255) gCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCGGCAGGTGTTTTAGCGGGTTGTTGa > 1:9525785/1‑68 (MQ=255) cATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa < 1:7136488/67‑1 (MQ=255) cATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa < 1:13168601/67‑1 (MQ=255) cATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGa < 1:24703363/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGAt < 1:2258593/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGAt < 1:23856262/67‑1 (MQ=255) aTTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATc < 1:11084892/68‑1 (MQ=255) TAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCca > 1:20421838‑M1/1‑68 (MQ=255) TAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCca > 1:10133979‑M1/1‑68 (MQ=255) | ATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCA > CP009273/3060603‑3060736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |