| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4501871 = | 211 (0.600) | 16 (0.060) | 7/92 | NT | 5.5% | coding (361/957 nt) | fecD | iron‑dicitrate transporter subunit |
| ? | CP009273 | 4501966 = | 379 (1.310) | coding (266/957 nt) | fecD | iron‑dicitrate transporter subunit | |||||
Only 100 of 312 total aligned reads displayed.
ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 | aCGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGc < 1:27107805/68‑1 (MQ=255) gCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCa > 1:18150490/1‑68 (MQ=255) cgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCAt < 1:9295724‑M1/4‑1 (MQ=255) ggTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATg > 1:10685851/1‑67 (MQ=255) cgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCATgcc > 1:10214929‑M1/61‑67 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCTGCATCTTCAGCAATATCAACCCCGCCATGccgccc > 1:17488560/1‑68 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc > 1:17049385/1‑68 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc > 1:17866824/1‑68 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc < 1:26372357/68‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc < 1:17178035/68‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc < 1:16537101/68‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc < 1:20341253/66‑1 (MQ=255) ccAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCa > 1:26695798/1‑68 (MQ=255) aGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCaaa > 1:26122440/1‑68 (MQ=255) cTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:5578654/68‑1 (MQ=255) cTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAg > 1:23794013/1‑67 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:23924671/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:1914575/67‑1 (MQ=255) ttCATCGGCGGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:19837290/67‑1 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc < 1:25917790/68‑1 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:25195472/1‑68 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:22254415/1‑68 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc < 1:14425612/68‑1 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:21141315/1‑68 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:1584716/1‑68 (MQ=255) cGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:28610744/1‑68 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:13024550/1‑67 (MQ=255) gCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCagcagc > 1:23540147/1‑68 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg < 1:963034/67‑1 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg < 1:20659302/67‑1 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg > 1:26315385/1‑67 (MQ=255) ggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgc < 1:3344689/68‑1 (MQ=255) tggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgca < 1:13203838/67‑1 (MQ=255) gTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgcagca > 1:27878895/1‑67 (MQ=255) cTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCAcc < 1:21684474/67‑1 (MQ=255) cTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCAcc < 1:19422108/67‑1 (MQ=255) tttGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCAt < 1:10872496/68‑1 (MQ=255) tttGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCAt < 1:7799206/68‑1 (MQ=255) gCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCAc > 1:16271651/1‑68 (MQ=255) ggcatcaccggatattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCCGCGGCAGCACCATCACg < 1:22437613‑M1/41‑1 (MQ=255) ggcatcaccggatattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg < 1:18555864‑M1/41‑1 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:19525324/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:13584801/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:23122245/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:5968104/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:11063697/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:9489370/1‑68 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:623358/1‑68 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:29157535/1‑68 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:25395609/1‑68 (MQ=255) aTCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACggg < 1:7474921/65‑1 (MQ=255) ccggatattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTg < 1:26922942‑M1/48‑1 (MQ=255) tCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGAc > 1:9255072/1‑68 (MQ=255) cAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:21987911/68‑1 (MQ=255) atattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:5711678‑M1/51‑1 (MQ=255) aGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg > 1:4800913/1‑67 (MQ=255) aGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg > 1:16320669/1‑67 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:14839535/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:7620234/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:7189996/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:14517925/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:505058/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACgg < 1:16044710/65‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACgg < 1:6428034/65‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc < 1:2402360/66‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:14307297/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:15332312/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:15086410/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:28260341/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:11824770/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:24847145/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt < 1:25588924/68‑1 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGGTGCGGCAGCAGCATCACGGGCAGTGAGGGCATaa < 1:15273927/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:1389321/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:7261923/68‑1 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCTGTGCCGGCATaagaa > 1:4093409/1‑68 (MQ=255) tgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCCCCATCACGGGCAGTGCCGGCATAAGAAGt < 1:11573415‑M1/62‑1 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCTTAAGAAGTa > 1:12912133/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCTTAAGAAGTa > 1:13518943/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:11410078/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:797260/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:11301507/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:12449994/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGCCGGCATAAGAAGTag > 1:4582822/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:8602184/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:8163316/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:20835845/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:18927259/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:24662943/1‑68 (MQ=255) ccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTaga > 1:11926149/1‑68 (MQ=255) ccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTaga > 1:18427884/1‑68 (MQ=255) cGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag < 1:12261528/68‑1 (MQ=255) cGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag < 1:27757574/68‑1 (MQ=255) cGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag < 1:3855095/68‑1 (MQ=255) cGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag < 1:15497441/68‑1 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCCCCATCACGGGCAGTGACGGCATAAGAAGTagag > 1:22593841/1‑67 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:791081‑M1/67‑1 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:6757200‑M1/67‑1 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:21358609‑M1/67‑1 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:5200868‑M1/67‑1 (MQ=255) | ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |