| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4506708 = | 289 (0.820) | 21 (0.070) | 7/94 | NT | 8.4% | coding (827/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | CP009273 | 4506742 = | 215 (0.730) | coding (793/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
Only 100 of 385 total aligned reads displayed.
TGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506642‑4506774 | cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc < 1:24915142‑M1/2‑1 (MQ=255)cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc > 1:17061928‑M1/67‑68 (MQ=255)cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc > 1:8850536‑M1/67‑68 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:6362531/1‑67 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:26619519/1‑67 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:14879981/1‑67 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:14479815/1‑67 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:22523728‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:25932403‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgggtgatagccacgctaacccgttaccGCAAcg < 1:10002154‑M1/6‑1 (MQ=255) gATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcg < 1:20309291/67‑1 (MQ=255) aaCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcgg > 1:16015093/1‑68 (MQ=255) aCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCggg < 1:14292342/68‑1 (MQ=255) gTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGa > 1:2625009/1‑67 (MQ=255) ttCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcgg < 1:25368245/61‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:23509028/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:13703052/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:11435199/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:11366330/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:21800211/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:24363707/1‑67 (MQ=255) cAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgc < 1:4661099/68‑1 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:26194230/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:5447280/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:9223053/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:14639826/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:562658/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:17939776/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:19418669/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:4275048/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:22773943/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca < 1:7965421/65‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca < 1:8458100/65‑1 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:13557329/68‑1 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:20134614/68‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:24060455/67‑1 (MQ=255) tttttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGtt < 1:3842875/68‑1 (MQ=255) ttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCg > 1:6631213/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:1634253/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:5992462/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:22977692/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:23318474/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:17369795/1‑68 (MQ=255) aGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTa > 1:28920863/1‑68 (MQ=255) aGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTa > 1:21994707/1‑68 (MQ=255) gggAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACg < 1:12201795/68‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:15469992/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGAGCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:9552035/67‑1 (MQ=255) gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg < 1:27453820/68‑1 (MQ=255) gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg < 1:26997193/68‑1 (MQ=255) gccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg < 1:15046186‑M1/49‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:27653980/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:26823917/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg > 1:27994869/1‑68 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg > 1:2912626/1‑68 (MQ=255) ccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGt < 1:15629836‑M1/50‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:24751046/68‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:1188475/68‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:10860888/68‑1 (MQ=255) cTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:21563129/67‑1 (MQ=255) cTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTg > 1:7799739/1‑66 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:28416816/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:15259251/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:3548644/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:19152085/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:16236576/1‑68 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:1340614/1‑68 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:13036586/1‑68 (MQ=255) ctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTTGcgtgggta < 1:2212011‑M1/55‑4 (MQ=255) cAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTa > 1:7431500/1‑68 (MQ=255) gcgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtc > 1:18893981/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:6258387/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:24564317/67‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:19877847/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:5249488/67‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:17211448/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:12637349/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:10139731/1‑67 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:23794685/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:8092099/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:28693462/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:1048109/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:19708740/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:21168286/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:323123/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:8556621/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:25207326/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTGGCGGTACCGGGTTAGCGTGGCTAtca > 1:28198385/1‑66 (MQ=255) ccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca < 1:18783533‑M1/58‑1 (MQ=255) ccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGGAACGGGTTAGCGTGGCTatcg < 1:21345842‑M1/58‑2 (MQ=255) cgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacc < 1:20723938‑M1/60‑1 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:5188428/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:24204277/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:17560033/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:16738481/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:27299789/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:9718125/1‑67 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:6908465/67‑1 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:6552717/67‑1 (MQ=255) ccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCAccc < 1:26454214‑M1/66‑1 (MQ=255) | TGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506642‑4506774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |