| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4583141 = | NA (NA) | 7 (0.020) | 5/90 | NT | NA | intergenic (+12/+37) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter |
| ? | CP009273 | 4583171 = | NA (NA) | intergenic (+42/+7) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter | |||||
Only 100 of 440 total aligned reads displayed.
TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583075‑4583208 | tGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAAt > 1:18914852/1‑68 (MQ=255)tGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAAt > 1:14177785/1‑68 (MQ=255) ggcactggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttAt < 1:2124894‑M1/2‑1 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:17621216/1‑67 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:16783523/1‑67 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:16119229/1‑67 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:7082910‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:12464468‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:3595268‑M1/62‑68 (MQ=255) cgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGATa < 1:15734412‑M1/10‑1 (MQ=255) cgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGATa < 1:6063743‑M1/10‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:5164399/68‑1 (MQ=255) aaaaTGGCCGGGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:13799997/68‑1 (MQ=255) aaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGc < 1:8545631/68‑1 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:19974197/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:24776719/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:26034010/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:25468994/1‑68 (MQ=255) tGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaa < 1:27096940/68‑1 (MQ=255) tGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaa > 1:7356506/1‑68 (MQ=255) gCCGTGGCAGATAGCGAGGAGATCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt > 1:5914030/1‑68 (MQ=255) gCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt > 1:8045727/1‑68 (MQ=255) gCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt > 1:1732691/1‑68 (MQ=255) ccGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt < 1:14506781/67‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATTAAAATGCCCGATAAGCAAAATGt < 1:27497019/68‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:9612255/68‑1 (MQ=255) cAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCg > 1:215729/1‑68 (MQ=255) aGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCgg > 1:7672563/1‑68 (MQ=255) taccGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:17270624/63‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:4367998/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:21938096/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:23271961/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:23736217/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:28807486/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:2660162/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:24704896/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:24115835/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:12935765/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:1518868/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:17148912/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:10799253/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:18267701/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:17749065/66‑1 (MQ=255) aGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCAt > 1:24941293/1‑68 (MQ=255) aGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCAt > 1:6609910/1‑68 (MQ=255) aGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCAt > 1:5606536/1‑68 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATaa < 1:11328378/67‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:20296100/66‑1 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:4979986/1‑68 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:25852694/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:16922500/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:9090830/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:19207975/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:9220229/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:29205811/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga > 1:4305727/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:7579386/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:20599189/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:23006421/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga < 1:4146621/66‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:8944505/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:12586071/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:24390545/67‑1 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCTTAAGGAGATTa > 1:10278831/1‑68 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTa > 1:20184791/1‑68 (MQ=255) cTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa < 1:19584862/68‑1 (MQ=255) cTGGGAAACATTTTAATCGCCATGAAAATGCCCCATAAGAAAAATGTTATCGGGCAAAAGGAGATTaa > 1:12034348/1‑68 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:26363157/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:15566755/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:21816945/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:4619724/68‑1 (MQ=255) ggggAAACATTTTAATCGCCATGAAAATGCCCGATCAGCAAAAAGTTATCGGGCATAAGGAGATTAAt < 1:20846059/67‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa > 1:14810883/1‑66 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:28414681/68‑1 (MQ=255) taaaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:24244620/2‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:3895877/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:22254262/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:15089829/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:27988974/67‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:6693077/67‑1 (MQ=255) aaaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt > 1:25609105/1‑68 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:7895033/67‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt > 1:25158817/1‑67 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:8266778/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:27209319/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:8867888/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:18697855/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:22625715/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:3356430/68‑1 (MQ=255) attaatctccttATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg < 1:19753339‑M1/56‑1 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:16595402/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:22039757/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:23477263/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:11089963/1‑68 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:13468873/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:12234910/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:10006887/68‑1 (MQ=255) cATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGa < 1:3134023/67‑1 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:6144814/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:23942937/1‑68 (MQ=255) | TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583075‑4583208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |