| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4583141 = | NA (NA) | 7 (0.020) | 5/90 | NT | NA | intergenic (+12/+37) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter |
| ? | CP009273 | 4583171 = | NA (NA) | intergenic (+42/+7) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter | |||||
Only 100 of 375 total aligned reads displayed.
GCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGTGCCCCC > CP009273/4583104‑4583238 | gCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa > 1:4174201/1‑68 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATaa < 1:11328378/67‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:21743177/66‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:20296100/66‑1 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:4979986/1‑68 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:13661500/1‑68 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:7251800/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:9090830/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:9220229/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:12499010/1‑68 (MQ=255) gagaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag > 1:14200557/1‑68 (MQ=255) agaACTTGGAACCATTTTACTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:23172829/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga > 1:8763098/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:6904853/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:20599189/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:5110005/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga < 1:19599320/66‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga < 1:16009650/66‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:8944505/67‑1 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGAt < 1:28386432/66‑1 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGAt < 1:24739957/66‑1 (MQ=255) cTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa > 1:12034362/1‑68 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:4619724/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:8919738/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:27598913/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:25354063/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa > 1:14810883/1‑66 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:15089829/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:4417056/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:22254262/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:2719978/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:7634658/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:3036653/67‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:16658730/67‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:6693077/67‑1 (MQ=255) ccacgtaaagattaatctccttATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:21855514‑M1/46‑1 (MQ=255) ccacgtaaagattaatcaccttatgcccgataacattttgcttatcgggcatAAGGAGATTAATCttt < 1:27210564‑M2/16‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:26549553/67‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTa < 1:23874947/68‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTa < 1:19714939/68‑1 (MQ=255) aCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTAc > 1:28540511/1‑68 (MQ=255) aTTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGt > 1:6058428/1‑68 (MQ=255) aTTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGt > 1:23627023/1‑68 (MQ=255) aTTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGt < 1:26255136/68‑1 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggt < 1:22355580/68‑2 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:1710564/68‑1 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:23445118/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:11441840/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:3356430/68‑1 (MQ=255) attaatctccttATGCCCGATAAGCAAATTGTTATCGGGCATAAGTAGATTAATCTTTACGTGGGTCg < 1:10858912‑M1/56‑1 (MQ=255) attaatctccttATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg < 1:10097724‑M1/56‑1 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:11089963/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:22039757/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:22765987/1‑68 (MQ=255) tCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGt < 1:19235110/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:21462795/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:10006887/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:26024572/68‑1 (MQ=255) cttatccccgataccattttgctaagcgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGc < 1:8126459‑M2/35‑1 (MQ=255) aaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCt < 1:5317416/68‑1 (MQ=255) aaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATAAATCTTTACGTGGGTCGTTGATCGGc < 1:24190700/67‑1 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:19828189/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:6144814/1‑68 (MQ=255) ATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGa > 1:24318170‑M1/1‑68 (MQ=255) CCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGaa > 1:18559649‑M1/1‑68 (MQ=255) CCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGaa > 1:17287571‑M1/1‑68 (MQ=255) CCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGaa > 1:7446956‑M1/1‑68 (MQ=255) CCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGaa > 1:21920417‑M1/1‑68 (MQ=255) GATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAAcc > 1:17417398‑M1/1‑68 (MQ=255) GATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAAcc > 1:28068815‑M1/1‑68 (MQ=255) GATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAAcc > 1:16860151‑M1/1‑68 (MQ=255) TAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAg > 1:18082701‑M1/1‑68 (MQ=255) TAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAg > 1:24923141‑M1/1‑68 (MQ=255) AGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGa > 1:18817883‑M1/1‑68 (MQ=255) aaaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGa < 1:24105691/68‑1 (MQ=255) aaaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGa < 1:8079367/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:10233677/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:8415048/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:29062790/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:12838423/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:26976344/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:3276181/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:25146250/68‑1 (MQ=255) aaaTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:14673133/68‑1 (MQ=255) aaaTGGTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGAt < 1:17631721/68‑1 (MQ=255) aTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGt > 1:3698533/1‑68 (MQ=255) aTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGt > 1:3992554/1‑68 (MQ=255) aTGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGt < 1:1575720/68‑1 (MQ=255) tGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACGAGGAAGATGt > 1:15463256/1‑67 (MQ=255) gTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTAc > 1:13378783/1‑68 (MQ=255) atcgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGcc > 1:24467013‑M2/10‑68 (MQ=255) atcgggcatAAGGAGATTAATCTTTACGTGGGTCGTCGATCGGCTGACGAACCAGGAAGATGTACGcc < 1:13238693‑M2/59‑1 (MQ=255) cgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAg > 1:10552616‑M2/8‑68 (MQ=255) cgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAg > 1:7822946‑M2/8‑68 (MQ=255) cgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAg > 1:20135151‑M2/8‑68 (MQ=255) cgggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAg > 1:6554969‑M2/8‑68 (MQ=255) ggcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGt > 1:25634582‑M2/6‑67 (MQ=255) gcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGTg < 1:124243‑M2/63‑1 (MQ=255) gcatAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGTg < 1:4341349‑M2/63‑1 (MQ=255) atAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGTGcc < 1:2124894‑M2/65‑1 (MQ=255) | GCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGACGAACCAGGAAGATGTACGCCAGTGCCCCC > CP009273/4583104‑4583238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |