| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3015939 | 437 (1.240) | 24 (0.080) | 12/96 | NT | 6.4% | coding (1265/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding |
| ? | CP009273 | = 3015996 | 324 (1.070) | coding (1322/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding | |||||
Only 100 of 449 total aligned reads displayed.
TTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015929‑3016063 | gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:22617831‑M2/68‑5 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:26775261‑M2/68‑5 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:8128908‑M2/68‑5 (MQ=255) ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTGATTAAAGAGCGAGTtggcggcg < 1:26187473‑M2/68‑9 (MQ=255) ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg < 1:29083413‑M2/68‑9 (MQ=255) cAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTTATGTCATTAAAGAGCGAGTtggcggcg > 1:5075265‑M2/1‑59 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTGATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:12045027/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGCGCGAGTtggcggcgtttt < 1:21690704‑M2/68‑13 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGCGCGAGTTGGCGGCGGttt > 1:11666033/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:27885286/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:24669552/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:14558944/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:343783/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:7006823/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:727672/1‑68 (MQ=255) tCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGCCGGtt < 1:6364321/66‑1 (MQ=255) gcgcgcCTCGTGGGCATGAAACAGCATAAAGGTCATGTCATTAACGACCGAGTtggcggcgtaagtgc > 1:11720630‑M2/1‑53 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgcca > 1:18711297‑M2/1‑51 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:13406719/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:2530596/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:16029546/67‑1 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTcc > 1:12932192/1‑68 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTgggcggcgtaagtgccatggt > 1:27654181‑M2/1‑47 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:22988848/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:10710448/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:22790939/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:20419349/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:11346510/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:7453672/68‑1 (MQ=255) tCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggta > 1:5743391‑M2/1‑46 (MQ=255) cGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAAc < 1:24301010/68‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg < 1:26513226/67‑1 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTTAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:18746106/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:8730219/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:19620003/1‑67 (MQ=255) gCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGa < 1:16296657/67‑1 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGGTCCAAACAGGACa < 1:1984723/67‑1 (MQ=255) aaCAGCATAAAGTTCATGTCTTTATAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct < 1:9386598/67‑1 (MQ=255) aaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctg < 1:19262551/68‑1 (MQ=255) aaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:12313056/1‑67 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGCGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:23523203/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:20131684/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:9762597/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:15328386/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:16595499/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:16894913/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:11912822/1‑66 (MQ=255) aTAAAGTTCATGTCCTTAAAGCGCGAGCtggcggcgtaagtgccatggtacctgggtggaggcgtg > 1:18399793‑M2/1‑28 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:11166612/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:20592329/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:14385311/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:21485010/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:26975425/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:7892602/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:4769449/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:14033735/67‑1 (MQ=255) tAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaag < 1:3364420/68‑1 (MQ=255) aaaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaaga < 1:6901787/68‑1 (MQ=255) aaaGTTCATGTCAGTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaaga > 1:13581694/1‑68 (MQ=255) aaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaagaa < 1:21878640/68‑1 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:2475534/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:3808876/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:17749020/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:12505731/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:14868960/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:16729818/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:13167125/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:27177151/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:12850405/1‑68 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtgt > 1:26701053/1‑68 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtgt < 1:8548538/68‑1 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt < 1:28654242/66‑1 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt < 1:2992561/66‑1 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt < 1:1052021/66‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgc > 1:2646861/1‑67 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:426645/1‑66 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:25713204/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:25532896/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:5334662/68‑1 (MQ=255) tAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTggg < 1:17502521/68‑1 (MQ=255) tAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTggg < 1:13846354/68‑1 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:17159314/1‑68 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:24151449/1‑68 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:5642921/1‑68 (MQ=255) aaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:29231430/1‑68 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:2125030/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:6145690/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:15659672/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:22324774/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:1799930/1‑67 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:4057638/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:23723545/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:21044713/1‑66 (MQ=255) gCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAAc < 1:2634187/66‑1 (MQ=255) gCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:10154615/68‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:4546057/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:28341823/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:259590/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:8461101/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:8993455/66‑1 (MQ=255) | TTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015929‑3016063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |