| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4170893 = | 292 (0.700) | 17 (0.050) | 7/90 | NT | 6.1% | intergenic (+40/‑280) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit |
| ? | CP009273 | 4170919 = | 287 (0.860) | intergenic (+66/‑254) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit | |||||
Only 100 of 155 total aligned reads displayed.
ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4170970‑4170893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcaccagccTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > CP009273/4170919‑4170985 ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAA > 1:16899434/1‑68ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAA > 1:29274098/1‑68ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAA > 1:12255475/1‑68ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAA > 1:15226288/1‑68 GCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTC > 1:22708224/1‑68 CAGTAGTCAAACAGTGTGAAACGCTCCTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTC > 1:14574935/1‑67 CAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTC > 1:34196911/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGGAAAAAGGCTGGTGACTAAAAAGT < 1:9089459/65‑1 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:2282980/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:2819376/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA < 1:1755867/67‑1 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:30744223/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:26547721/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:19444828/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:20234513/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:13254928/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:23230946/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:12490801/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:8551934/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:8759795/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCA > 1:22075231/1‑67 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTC < 1:27615994/66‑1 AGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAG < 1:33667848/64‑1 AGTAGTCAAACAGTGTGAAACGCTACTCGCCCCTTACAGCTCAAAAAGTCTGGTGACTAAAAAGTCA > 1:743352/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAG < 1:18794432/68‑1 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCA > 1:26168140/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCA > 1:31839903/1‑67 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCA < 1:11137940/67‑1 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACC < 1:28003468/66‑1 AGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACGAAAAAGTCACCA > 1:30390042/1‑67 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:9718240/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:26489765/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:32172571/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:4312411/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:2359472/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:6551852/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:6822278/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:9017205/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:9574124/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:10365851/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:11012476/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:11422430/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:12136399/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:1327011/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:17659627/1‑68 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC > 1:18430330/1‑68 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:10136740/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:6932383/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:12950445/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:5090878/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:15691930/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC < 1:31077713/67‑1 CAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGC < 1:21891259/66‑1 GTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGC < 1:25687639/68‑1 GTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGC < 1:502811/66‑1 GTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGC < 1:16288345/66‑1 GTGAAACGCTACTGGCGCCTTACAGCACAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGC < 1:3014227/68‑1 GTGAAACGCTACTGGCGCATTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGC < 1:14237668/66‑1 CGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGC < 1:25826389/52‑1 TACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACAAAAAAGTCACCAGCCTTTTTGCGCTTTAAGGCG < 1:927542/68‑1 TACTGGCGCCTTACAGCGCAAAAAGGCGGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCG < 1:23819760/68‑1 cttCAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGT < 1:30077145/65‑1 TTACAGCGCAAAACGGCTGGTGACTAAAAAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGT < 1:7296917/68‑1 AAAAAGGCTGGGGACTAAAAAGGCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACT < 1:34217446/67‑1 tGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:5494597/67‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:16334577/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:7978062/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:16468936/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:17588052/68‑1 AGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:24577642/68‑1 AGTCACCAGCCGTTTTGCGCTGTAAGGCGGCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT < 1:1913382/68‑1 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:15882832/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:14525713/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:25344610/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:34151356/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:8729021/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:31793801/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:10766114/1‑67 GTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTT > 1:28406391/1‑67 CACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTC < 1:12506789/67‑1 cctGCCTTTTTGCGCTGTAAGGCGGCAGTTGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:6514726/65‑1 aCAGCCTTTTTGCGCTGTAAGTCGCCATTAGCGTTTAACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:19258296/67‑1 CCAGCCTTTTTGCGGTGTAAGGCGGCTGTTGCTTTTCACACAGTTTGACTACTGCTGTGCCTTTCAAT < 1:3205138/68‑1 CCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAAT < 1:33476665/68‑1 CCAGCC‑TTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATG < 1:32338703/68‑1 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:27503613/1‑68 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:19775914/1‑68 CCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTT > 1:27462609/1‑68 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:25529388/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:5401219/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > 1:414029/1‑68 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:8329931/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:24539680/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:24119849/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > 1:19376775/1‑68 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:16646518/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG < 1:2271325/68‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:400332/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:32005179/65‑1 CTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGC < 1:31108187/65‑1 ACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4170970‑4170893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcaccagccTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTG > CP009273/4170919‑4170985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |