| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1240767 = | 360 (0.870) | 42 (0.120) | 21/96 | NT | 11.6% | coding (152/441 nt) | ycgY | uncharacterized protein |
| ? | CP009273 | = 1302830 | 333 (0.940) | coding (73/1461 nt) | clsA | cardiolipin synthase 1 | |||||
Only 100 of 178 total aligned reads displayed.
AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240840‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTC < CP009273/1302830‑1302764 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:10601665/68‑1AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC > 1:4593578/1‑68AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:2776103/68‑1 ATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCG > 1:28812667/1‑68 TCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGT > 1:25163018/1‑68 TCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGT > 1:13992265/1‑68 TCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGT > 1:26649634/1‑68 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:11360545/1‑68 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:25398023/68‑1 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:33024843/68‑1 ACATAATCCAGACACTCCATAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAA < 1:34360184/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCGTTCCTCTTCGCGTAAC < 1:26487187/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:21856826/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:2721492/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:362348/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:3547929/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT < 1:26112202/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT < 1:13561059/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:18884900/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:34190243/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:16421287/1‑65 TCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC < 1:5433460/68‑1 CAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGC > 1:17915659/1‑68 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:20121740/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:9566659/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:2405246/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:11115832/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:21963236/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:19489698/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:13315795/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:19130281/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:15039163/1‑67 ACACTACAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAa > 1:6543103/1‑66 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:15855802/1‑66 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:11654823/1‑66 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:20560336/1‑66 ACTGCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCT < 1:725724/68‑1 TCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAA < 1:15496219/68‑1 TCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:26954632/49‑1 GAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAAC > 1:29233035/1‑68 GAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAAC > 1:23472746/1‑68 ATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACG > 1:15959645/1‑67 AACCAATAAAATAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATTAAACGACGCGC < 1:835085/66‑1 TCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGG < 1:16184766/68‑1 TCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGG < 1:18621975/68‑1 CAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGC < 1:25533170/68‑1 CAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGC < 1:9526819/68‑1 CCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTG > 1:31059901/1‑67 CCATTACTCTTCGCGTTACTTTACTCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGG < 1:21929640/68‑1 TCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGT < 1:30055725/68‑1 CCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTT < 1:4793547/68‑1 TCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTTGCTGTTGA < 1:24092336/68‑1 TCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGA > 1:31844989/1‑68 GCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:1244344/68‑1 GCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:28707492/68‑1 aGTAACTTTACGCATTGTAATGAAACGACGCGGAGTTCCCTCCGCGATGGCCTGGCTGTTGTTTATT < 1:31251281/66‑1 CGTAACTTTACGCATTCTAATGAAACGACTCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:30375144/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:6848234/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:5881925/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:14520898/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:16576530/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:3352699/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:1814026/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:32838347/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:32195469/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:19208423/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:28508235/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24334911/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:19429855/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:22995670/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:12986101/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:17154641/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:34035210/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:19153438/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:9331064/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:19935296/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:7687511/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTAT < 1:2239499/66‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTAT < 1:50762/66‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:20441043/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:32434506/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:10961040/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:12373878/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:25566135/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:23599994/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGANGGCCTGGCTGTTGATTAT < 1:13140/66‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTACCTCCGCGATGGCCTGGCTGTTGATTA < 1:230381/65‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTAC < 1:33061173/67‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTAC < 1:30576280/67‑1 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:10378657/1‑68 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:3498899/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:1825442/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:2145003/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGG < 1:27440220/45‑1 CTTTACACATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCAGTAGATTATATACAT > 1:10039191/1‑67 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTC < 1:12882134/68‑1 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTC < 1:28176905/68‑1 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:11142873/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCCCGATGGCCTGGCTGTTGATTATTTACAT > 1:6186880/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCAGCGATGGCCTGGCTGTTGATTATTTACAT > 1:12014975/1‑66 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240840‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTC < CP009273/1302830‑1302764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |