| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 7 (0.020) | 5/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 151 total aligned reads displayed.
TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925252‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGC < 1:19595245/68‑1 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG < 1:31730011/68‑1 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG > 1:13617208/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:7712390/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:4880912/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:7142805/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:3682807/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:1636091/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:24853557/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:14123671/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:8982106/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:33287039/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:26586549/1‑68 TAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:12634585/1‑68 TAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:19759824/1‑68 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTAT < 1:22271298/68‑1 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:33781739/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:20556169/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:25421104/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:33575135/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:24753812/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:4318538/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:29847795/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:16837635/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:715796/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:17700560/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:587082/1‑67 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:5782030/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:10888355/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:18766865/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:24838330/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:19729694/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:15586123/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:14386081/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:26972118/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27279539/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27458981/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:7529943/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:28143165/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:28183296/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:30493659/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:28923807/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:29414004/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:2964706/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:10350417/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:2434130/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:6495854/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:17569539/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:20308049/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:20795828/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:20976750/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:22150246/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:23053099/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:23174637/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:23185283/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:24276368/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:34302658/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACCACGTTTGCGGCGTATCCG > 1:13331959/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTCATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:4694993/1‑68 GCTTTACCATACCGCCTGGTAAATGCGATGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:21960708/1‑68 GCTTTA‑CATACCGCCTGGTAAATGCGCGGATGTGATAATTCCGGGTACGACCTTTGCGGCGTATacc > 1:9691330/1‑64 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC < 1:12390339/68‑1 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGG < 1:29342239/67‑1 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27366504/1‑66 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:25555171/1‑66 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:19571272/1‑66 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:103656/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:17284196/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:18508218/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:18557/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:18838583/68‑1 CCATACCGCCTGGTAAATGCGCTGAGGGGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:11420382/68‑1 GGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCG < 1:9427047/68‑1 GGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCG < 1:6288919/68‑1 GATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGCATTTACCAGGC < 1:30957035/68‑1 TGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCG < 1:938649/67‑1 CGTATCCGGCATTATCACATCCGCGCATTTACCAGGCGGGATGGTAAAGCTCTACAATATCCTCAAGC > 1:30379156/1‑68 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:2865259/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:18565278/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:3128804/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:31713071/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAG < 1:33211601/67‑1 TATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGT > 1:7403042/1‑68 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:18384699/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:13971677/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:8460805/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:24744362/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:3247588/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:2626265/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:20054497/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:409939/1‑67 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGC < 1:25974414/68‑1 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGC < 1:2785483/68‑1 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:31972834/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:25702579/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:14414556/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:788256/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:20147486/1‑68 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:15883455/1‑67 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:18925517/1‑67 TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925252‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |