| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 7 (0.020) | 5/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 494 total aligned reads displayed.
AATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925140‑2925273 | aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:12701483/67‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:32303691/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:22866585/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:24551961/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:16981666/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:4114005/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:391032/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:14600817/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:3453205/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:31130912/68‑1 (MQ=255) tttACAGCAATTGCGGGTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:18545089/68‑1 (MQ=255) ccataccgcctggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTa < 1:17284196‑M2/4‑1 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTGGTATCCGGCATTATCACAt > 1:2428606/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCAATATAACAt > 1:20487812/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACCCCCCCAACGTCGTATACGGCATTATcaca > 1:13592915/1‑67 (MQ=255) cAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTATACGGCATTATCACAta > 1:11133518/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATc < 1:8130981/67‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:30931595/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:29297252/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCAAATCAgc > 1:25238175/1‑67 (MQ=255) gCGGTTGGTACGGGTACGGCGAGCCGGATACGGCGCAAACGTCGTATCGGGCATTATCACTTGAgcgc < 1:27439165/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCa < 1:16638168/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCCGCTACCCCCCCAACGTCGTTTACGGGATTATAACAACACCGCa > 1:33259734/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCGGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:1304905/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTTTCCGGCATTATAACATCAGCGCAt > 1:30005956/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:15214822/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCCGATAAGCCGCAAACGTCGTATCCGGCATTATCACATCACCGCaa > 1:27273863/1‑67 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:17861846/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:8717927/68‑1 (MQ=255) gcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:33491016‑M1/51‑1 (MQ=255) cgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTAcc < 1:18825751‑M1/53‑1 (MQ=255) tACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTTCCa > 1:23600048/1‑68 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:1282581/68‑1 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:20841402/68‑1 (MQ=255) tgtgataatgccggatacgacgtttgcggcgtatccggcATTATCACATCAGCGCATTTACCAGGCg < 1:938649‑M2/28‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:17711067/67‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:22204922/67‑1 (MQ=255) tAACGGCGAGCCCGAAACGCCGCAAACGTCGTATCCCGCATTTTCACATCAGCGCATTTACCAGGCgg > 1:14069820/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTTTCACATCAGCGCATTTTCCAGGCGGt > 1:20053478/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTAt > 1:4449535/1‑43 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCggg > 1:32665428/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5404083/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1487868/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15562990/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:29774434/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:16156078/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:16405254/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:14360599/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:27657089/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18275058/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:11656338/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:26480289/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:11393646/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5669355/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5861493/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19560962/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:20978486/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:23931863/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:10094504/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7496911/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGGCGTATCCGGCATTATCACATCAGCGCATTTTCCAGggggg > 1:5169816/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCAGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15904586/68‑1 (MQ=255) aaCGGCGAGCCGGATACCCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTTCCAGGCGGt > 1:9016749/1‑68 (MQ=255) aaCGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCAGTTAACAGGCGGt > 1:29529854/1‑68 (MQ=255) aaCCGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:10757820/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCACCGCATTTACCAGGCGGTATg > 1:7379951/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:26007241/67‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:21757772/67‑1 (MQ=255) ggtATACGCCGCAAAGGTCGTACCCGGAATTATCACATCCGCGCATTTACCAGGCGGTATG‑TAAAGc > 1:9691330‑M1/4‑67 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:4673705‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:9476798‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:6495854‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:10350417‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:19729694‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:28183296‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:23174637‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:26972118‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGGCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:24788636‑M1/1‑68 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:32901261‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:33781739‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:715796‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTa > 1:31305359‑M1/1‑68 (MQ=255) CGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACa < 1:31730011‑M1/68‑1 (MQ=255) ccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAat > 1:29064751/1‑68 (MQ=255) cgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAata > 1:2555175/1‑68 (MQ=255) cgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGATCTACAata > 1:22501886/1‑68 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:34072961/68‑1 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:6980093/68‑1 (MQ=255) aaaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATcc < 1:12148470/68‑1 (MQ=255) aCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTc > 1:27875340/1‑68 (MQ=255) cgtatccggcATTATCACATCCGCGCATTTACCAGGCGGGATGGTAAAGCTCTACAATATCCTCAAGc > 1:30379156‑M2/11‑68 (MQ=255) cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc < 1:2865259‑M2/58‑1 (MQ=255) cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc < 1:18565278‑M2/58‑1 (MQ=255) tccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:8460805‑M2/7‑67 (MQ=255) tccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:18384699‑M2/7‑67 (MQ=255) ccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGc < 1:25847982‑M2/63‑1 (MQ=255) gcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc > 1:788256‑M2/3‑68 (MQ=255) gcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc > 1:20147486‑M2/3‑68 (MQ=255) gcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc > 1:31972834‑M2/3‑68 (MQ=255) cATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc > 1:18925517‑M2/2‑67 (MQ=255) | AATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925140‑2925273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |