| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 7 (0.020) | 5/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 492 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | gaagcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGc > 1:788256‑M1/67‑68 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:10582773/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:26329050/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:3828315/68‑1 (MQ=255) gcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg < 1:25847982‑M1/5‑1 (MQ=255) tACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGa > 1:804931/1‑68 (MQ=255) tACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGa > 1:3267039/1‑68 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:24744362‑M1/62‑67 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:3247588‑M1/62‑67 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:18384699‑M1/62‑67 (MQ=255) aaaCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAc > 1:8910228/1‑68 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:18565278‑M1/10‑1 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:28031855‑M1/10‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGCTAcg > 1:13871943/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGCTAcg > 1:15859483/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:20574860/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:29546061/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:30369036/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATaag > 1:26982603/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATaac > 1:5524050/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAcg > 1:23382083/1‑67 (MQ=255) ccGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAcgcc > 1:22216836/1‑68 (MQ=255) cGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGCTAcgcc > 1:17131443/1‑67 (MQ=255) gATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgccgc > 1:30917336/1‑68 (MQ=255) tttGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCa < 1:13288541/67‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGGCGCAAAcg > 1:25301688/1‑68 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtc > 1:27283631/1‑68 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAAcggc > 1:16832374/1‑66 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:11230564/68‑1 (MQ=255) atCGACCGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:30976954/68‑1 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTAt < 1:8635999/68‑1 (MQ=255) aCGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATcc > 1:22676125/1‑68 (MQ=255) aCGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTATcc > 1:7558521/1‑68 (MQ=255) ggCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGGCGGATACGCCGCAAACGTCGTATCCgg < 1:23616465/68‑1 (MQ=255) ggCAATTTACAGCAAATGCGGTGGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCgg < 1:15993909/68‑1 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:21522881/67‑1 (MQ=255) tttCCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:2435978/68‑1 (MQ=255) tttACCGCAATTGCGGTTGGTACGGAAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:20938002/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:9614622/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:9417860/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:8438844/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:7434829/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:27757121/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:3168252/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:29217691/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:22866585/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:12768503/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:14600817/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGGACGGTACCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:17964725/68‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc > 1:10333302/1‑67 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCCCCAAAGGCGTAGCCGGCATTATc > 1:14293069/1‑67 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAACCCGCAAACGTCGTATACGGCATTATc > 1:16625967/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca > 1:4386993/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACCCCCCCAACGTCGTATACGGCATTATcaca > 1:13592915/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATc < 1:19736720/67‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATCa > 1:21082096/1‑68 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:17613567/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:29726168/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:20066818/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:4553560/68‑1 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCGGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:1304905/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTTTCCGGCATTATAACATCAGCGCAt > 1:30005956/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:15214822/1‑68 (MQ=255) tgcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCTTTATCACATCAGCGCAttt < 1:20255979‑M1/50‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:27525987/67‑1 (MQ=255) ggTAAGGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:34507440/68‑1 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:28744209/68‑1 (MQ=255) aaCGGCGAGCCTTATACGCCGCATACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:33971787/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:4112490/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:6885347/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:489244/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:581770/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1487868/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:12899392/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:11656338/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:10890728/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:9270260/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:10094504/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:23911596/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:24013322/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:21858913/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:32268429/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31809396/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31259740/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:16156078/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19420358/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18275058/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:17746949/68‑1 (MQ=255) aaCGGCGAGCCGGATACCCCGCAAAAGTCGTAAACGGCATTATAAAAACACCGCAATTACCAGGCCGt > 1:7340155/1‑68 (MQ=255) aaCGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:33241418/1‑68 (MQ=255) aaCGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTAACCGGCGGt > 1:16373567/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:28635158/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:18861397/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:33417337/68‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCCCCTCAGCGCATTTACCAGGCGGTATgg < 1:11420382‑M1/64‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:6584894‑M1/64‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:26007241/67‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt > 1:33748308/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATCAGCGCATTTTCCAGGGGGTATggg > 1:32893829/1‑67 (MQ=255) GCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTaaa < 1:12390339‑M1/68‑1 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |