| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 419 (1.010) | 20 (0.060) | 8/96 | NT | 5.5% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 329 (0.930) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 103 total aligned reads displayed.
AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999197‑3999263 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:5146822/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:2354958/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCAACCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:10228057/1‑68 GATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:2542044/1‑67 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:11111437/1‑68 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:25846587/1‑68 TTCAACCCTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAACCCAGGCGCTATTTTCAGC > 1:29761173/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG < 1:20169618/68‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:17757148/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC < 1:18548853/67‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:16495853/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:18792055/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:23343145/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:26534544/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:12856063/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:28136480/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:29564929/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:32041909/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:34079184/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:11057303/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:10799036/1‑67 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:1384675/1‑66 AACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:30769750/1‑65 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:27304165/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:33346418/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:22902296/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:22284225/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:20609043/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:34252566/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:8191758/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:14040204/1‑67 CACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGT < 1:4654565/68‑1 CACTTCCGCCTCCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGT < 1:17303136/68‑1 CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCCGCGCCTGTTTTTATTTCAGGCA < 1:16969407/67‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTTTTTTTATTTCAGGCAAT < 1:14764707/68‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:18005704/68‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:36320/68‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:2355593/68‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:10493593/68‑1 TCACCCCGATTTCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:23334186/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:31187944/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:32399021/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:27419399/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:11513530/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:21139664/68‑1 TCACCCCGATTCCCTGAAATAAAAACAGGCGCTATTATCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:13729930/68‑1 CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:14699668/68‑1 CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:11499048/68‑1 CCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGA < 1:22721223/68‑1 CCCGATTCCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGA < 1:23485533/68‑1 CCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAA < 1:440946/68‑1 GCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGC < 1:7543863/68‑1 AAACAGGCTCTATTTGCAGGGCCTTTTTTTATTTCAGGAAATCGGGGTGAATGTGGCGCAGGCGGAAG < 1:143413/68‑1 AGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCC > 1:18894450/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:7261510/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:24447327/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:12433652/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:34247934/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:7569812/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:17327534/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:17294255/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:6895868/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:31714129/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:12021408/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:32310283/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:10032010/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:32556813/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:33462311/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:11502531/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:4741284/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:6329839/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:4030514/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:4116721/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:12856320/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:22789203/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:24544392/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:13709135/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:2574509/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:12941729/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:26245383/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:26261231/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:26749328/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:18847644/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:12506009/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:28559063/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:29065975/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:17189399/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:3600055/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:15921539/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:19460983/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:18376539/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:22408269/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:12051502/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:12296824/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTGGAATCTGGAGTCCGGAGC < 1:13848991/68‑1 TGTTTTTATTTCAGGCAATCGGGGTTAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:16787916/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:20758290/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:12605649/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:29200807/67‑1 GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA < 1:32367930/68‑1 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999197‑3999263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |