| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 419 (1.010) | 20 (0.060) | 8/96 | NT | 5.5% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 329 (0.930) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 548 total aligned reads displayed.
GCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999110‑3999241 | gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:19460983‑M1/3‑1 (MQ=255)gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:22408269‑M1/3‑1 (MQ=255)gctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:12296824‑M1/3‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc > 1:32556813‑M1/64‑68 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc > 1:12021408‑M1/64‑68 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:12506009‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:22789203‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:4741284‑M1/5‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAgg < 1:3593049/67‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:4225795/68‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:27369369/68‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:28080350/68‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:1613860/68‑1 (MQ=255) aaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcg < 1:1642104/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:1545070/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:6844153/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:2927234/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:13800944/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:9313254/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:26740422/68‑1 (MQ=255) tGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGa < 1:30831693/68‑1 (MQ=255) aagccAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:7726470/64‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaaa > 1:21836496/1‑68 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:1465055/67‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:29876505/67‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGGTGTTTCTCGCGCAGGCGCTGAAAAt > 1:14953680/1‑68 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAAt > 1:11110491/1‑68 (MQ=255) cAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgc < 1:1587968/68‑1 (MQ=255) tCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTg < 1:30611048/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTTAAAGCGTTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:14039362/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:25881913/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:18951469/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:11604844/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:32059773/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:26126045/68‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCATTTTCTCGCGCAGGCGATGAAAATAGCGCCTGTTTTTa > 1:31041756/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGttt < 1:18858461/65‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGttt < 1:17871093/65‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGttt < 1:10565371/65‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:8142461/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:12925752/1‑68 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa < 1:26903962/67‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:34230952/68‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:3360383/68‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCGGTTTTTAt > 1:9538237/1‑68 (MQ=255) cccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTc > 1:19748898/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:20059738/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:5571835/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:8556904/1‑68 (MQ=255) tctcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAgg < 1:23675469/68‑1 (MQ=255) gccacattcaccccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGc < 1:7543863‑M1/36‑1 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa > 1:10311675/1‑68 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:17330825/68‑1 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGATGAAAATAGCGCCTGTTTTTATTTCAGGCa > 1:166670/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:26281341/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:33879549/1‑67 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:6030159/1‑68 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:11441816/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:6684625/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:31341309/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:1674853/65‑1 (MQ=255) tcaccccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGGAATCggg < 1:23485533‑M1/43‑1 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:4523339/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:28442285/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:28628878/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:3699038/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:22069940/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:21396587/1‑68 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:23881815/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:14343039/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:4862744/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:20822243/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:31464306/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:23199808/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:7020059/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:28984509/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:24256146/67‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:21139664‑M1/47‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:33298207/68‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:20379540/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:6296769/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:7089101/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:17252637/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:27669594/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:18155152/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:13200063/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:30317262/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:30067850/68‑1 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:25154571/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:24680538/1‑68 (MQ=255) tGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc < 1:14485255/68‑1 (MQ=255) tGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc < 1:32325521/68‑1 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:25374764/1‑68 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:517059/1‑68 (MQ=255) ttCTCGCGCAGGCTCTTAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:20706619/68‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:9782332/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc > 1:8967752/1‑68 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:10008461/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:18389752/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:27494670/1‑68 (MQ=255) | GCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999110‑3999241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |