| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 524 (1.260) | 27 (0.080) | 11/94 | NT | 5.3% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 531 (1.530) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 145 total aligned reads displayed.
TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046719‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAA > 1:33755871/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:1078663/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:22487304/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:11004136/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:9558000/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:30827968/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:12403363/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:31514913/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:13532129/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:33412367/1‑68 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:19108493/1‑68 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:28127268/1‑67 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:17646145/1‑67 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGGGATTTAAATAGTGAATG > 1:25189124/1‑67 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGATATCTCTGGTGATTTAAATAGTGAATG > 1:22613336/1‑67 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTGTCGGGTGATTTAAATAGTGAATGGC < 1:12642941/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:21305952/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:17961087/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:2061416/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:28950335/68‑1 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:1411390/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:28089395/1‑66 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:10909617/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:4388168/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:12411142/1‑68 TACGTATCTGCGCCACAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:19387524/68‑1 TACCTATCTGCGCCTGAAAGAGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:30604132/68‑1 TACCTATCTGCGCCAGAACGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:16273550/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:13224562/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:32234485/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:24353472/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:6739738/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:4371332/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:28932322/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:25618253/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:3080606/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:29654629/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:25137789/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:20958009/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:15292204/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:19520262/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTT‑AATAGTGAATGGCGCTT < 1:33196788/67‑1 TATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGT < 1:30677815/68‑1 TATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGT < 1:13319887/68‑1 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTTAACGAAGCGCCATTC > 1:8054553/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:23109593/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACGTTGTAAACGAAGCGGCATTC > 1:9619864/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACGTTGTAAACGAAGCGCCATTC > 1:19208944/1‑68 AGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCGTTCGTTTTGTACTTTGTAAACGGAGCGCCATTC > 1:27707969/1‑68 TCTCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACT > 1:22289688/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAATCGAAGCGCCATTCACTAT > 1:29672667/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTAT > 1:2747788/1‑68 CGGGTGCTTTAAATAGTGAATGGCGCTTTCGTTTTCTTCTTTGTAAACGAAGCGCCAGTCACTAGTT > 1:2721716/1‑67 CGGGTGATTTAAATAGTGAATGGCGGTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:12733691/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGTAGCGCCATTCACTATTTA > 1:1633956/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:5994693/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:31134885/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCTTTCACTATTTAAA > 1:7822859/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGGTTTCTACTTTGTAAACGAAGCGGCATTCACTATTTAAA > 1:32049990/1‑68 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:2087381/1‑67 GATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATC > 1:25101480/1‑67 ATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGA > 1:13674106/1‑68 ATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGA > 1:11633933/1‑68 TAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAG > 1:21833411/1‑68 GAATGGCGCTTTCGTTTTCTACTTTGTAAACGCAGCGCCAGGCACTATTGAAATCACCCGAGAGA > 1:19874513/1‑65 TGGCGCTTTCGTTTTCTACTTTGTATACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT < 1:11967898/68‑1 TGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGC < 1:32743989/67‑1 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAATTCCCCGGGGGGAACTGCT > 1:27233230/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:29293293/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:20189994/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:22687530/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:23411714/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:6984091/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:24228335/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:4956049/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:12723257/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:3913804/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:33419607/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:19565150/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:13463772/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:16654452/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:30580083/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:28432217/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:19375116/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:26238795/1‑67 GCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCAAGAGAACTGCTGC > 1:12126364/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:26962827/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:3908849/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:5194712/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:29715341/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:18820479/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:17240591/1‑68 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCAT < 1:22490649/68‑1 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA < 1:27048464/67‑1 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA < 1:15955754/67‑1 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:33714776/1‑67 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA < 1:5203587/67‑1 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA < 1:6185926/67‑1 CTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCAT > 1:32461193/1‑67 TTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC > 1:10764582/1‑68 TGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046719‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |