| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 524 (1.260) | 27 (0.080) | 11/94 | NT | 5.3% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 531 (1.530) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 904 total aligned reads displayed.
TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 | tACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:24353472‑M1/68‑1 (MQ=255)tACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:32234485‑M1/68‑1 (MQ=255) aCCTATCTGCGCGAGAAAGCGCGGATGCAGCAGTTATCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:15020918/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:30740991/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:17627000/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:22152165/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:13152716/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:8814196/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:9287702/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:10010554/1‑68 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:25628246/68‑1 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:30475565/68‑1 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:21696512/68‑1 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:17975963/68‑1 (MQ=255) cTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGt < 1:30959639/68‑1 (MQ=255) cTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGt > 1:34165270/1‑68 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:29398627/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:22798313/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:10390582/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:16932444/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:16609574/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:1213608/1‑67 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt < 1:13396006/67‑1 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt < 1:26319414/67‑1 (MQ=255) aaaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaa > 1:13924878/1‑68 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:17135360‑M2/1‑60 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:4956049‑M2/1‑60 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTATACAAAGTAGAAAACGAaagcgcca < 1:11967898‑M2/68‑9 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:23716056/1‑68 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:2092584/67‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:4542288/1‑68 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:31633806/68‑1 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactat > 1:2747788‑M1/1‑31 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:7007476/1‑67 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:21252559/1‑66 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:5509573/68‑1 (MQ=255) ctcGGGTGATTAAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:25951899/68‑1 (MQ=255) cGGGTGCTTTAAATAGTGAATGGCGCTTtcgttttcttctttgtaaacgaagcgccagtcactagtt > 1:2721716‑M1/1‑28 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTg > 1:19352977/1‑68 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTg > 1:7991182/1‑68 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTg > 1:15410584/1‑68 (MQ=255) cGGGCGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGACATCAATGTGCTg > 1:16067908/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaa > 1:19558751‑M1/1‑26 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaa > 1:21916282‑M1/1‑26 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:31201819/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:32929664/1‑68 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga > 1:18587092/1‑68 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:654987/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:23965093/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:23064348/67‑1 (MQ=255) gATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatc > 1:25101480‑M1/1‑23 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACaa < 1:8264907/68‑1 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACaa > 1:20237685/1‑68 (MQ=255) ttAAATCGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAg < 1:29190213/68‑1 (MQ=255) ttAAATAGTGAATGGCTCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCATTGTGCTGAGAACAAg < 1:3845531/68‑1 (MQ=255) tAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGa > 1:3508566/1‑68 (MQ=255) tAAATAGTGAATGGCGCTACGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccg > 1:1633956‑M2/1‑40 (MQ=255) aTAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgaga > 1:11633933‑M1/1‑16 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:27023550/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:2861406/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:29916895/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:1120796/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:28485434/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:31941133/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:13635191/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:2671539/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:20594620/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:12531430/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg < 1:9575137/68‑1 (MQ=255) tAGTGAATGGCGCTTtcgttttctactttgtaaccgaagcgccattcactatttaaatcacccgagag > 1:4778786‑M1/1‑15 (MQ=255) tAGAGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:2799849/1‑67 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:10678018/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:254567/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:14523732/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:7560572/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:6732783/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:22674289/1‑66 (MQ=255) tGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTg > 1:8513631/1‑68 (MQ=255) gAATGGCGCTTtcgttttctactttgtaaacgcagcgccaggcactattgaaatcacccgagaga > 1:19874513‑M1/1‑11 (MQ=255) gAATGGCGCTTCGTTTACAACGTAGAAAACGAaagcgccattcactatttaaatcacccgagagaact > 1:19208944‑M2/1‑32 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:4121128/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:7784086/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa > 1:23378543/1‑68 (MQ=255) gAATGGCGCTCCGTTTACAAAGTACAAAACGAacgcgccattcactatttaaatcacccgagagaact > 1:27707969‑M2/1‑32 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacccgagagaactg > 1:10928291‑M2/1‑30 (MQ=255) tGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgc < 1:32743989‑M1/67‑60 (MQ=255) tGGCGCTTCGTTTACAAAGTAGAGAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:12808232/1‑68 (MQ=255) tGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc < 1:14753370/68‑1 (MQ=255) ggCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgct > 1:33419607‑M1/1‑7 (MQ=255) ggCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGACTGATgc > 1:2820526/1‑67 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:24625414/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:592597/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:12290238/1‑66 (MQ=255) cgcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgca > 1:29715341‑M1/1‑5 (MQ=255) gcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgca < 1:6185926‑M1/67‑64 (MQ=255) gcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgca < 1:5203587‑M1/67‑64 (MQ=255) gcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgca > 1:33714776‑M1/1‑4 (MQ=255) gcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:22389949/1‑68 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:15633064/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:18786693/67‑1 (MQ=255) | TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |