| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 499 (1.200) | 22 (0.070) | 9/90 | NT | 6.2% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 263 (0.790) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 694 total aligned reads displayed.
GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 | gCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATg > 1:14530316/1‑67 (MQ=255)gCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATg > 1:85869/1‑67 (MQ=255)cctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGc > 1:31173391‑M1/67‑68 (MQ=255) ctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGcc > 1:5786649‑M1/66‑68 (MQ=255) ctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGcc > 1:19225168‑M1/66‑68 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:23504995/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:27025361/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:30278873/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:4655199/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:22629253/67‑1 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:32131965/68‑1 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:7407876/68‑1 (MQ=255) tttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCt < 1:942543/67‑1 (MQ=255) tttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCt < 1:25213122/67‑1 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:6419360‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:16604269‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:1632143‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:26653524‑M1/62‑68 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:19076976/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCCATGCCCTAt < 1:15191078/68‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc > 1:13382362‑M1/61‑68 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc < 1:20662784‑M1/8‑1 (MQ=255) tACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATc < 1:29583607/68‑1 (MQ=255) tACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATc < 1:10367601/68‑1 (MQ=255) aCCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCg < 1:5952215/68‑1 (MQ=255) ccAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCg > 1:24179051/1‑67 (MQ=255) ccAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGt < 1:17480512/68‑1 (MQ=255) ccAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGt < 1:32636247/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:1717848/1‑66 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:492206/1‑66 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:4280865/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:26337534/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:25908246/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:27390387/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:33661055/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:11264108/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:20412983/68‑1 (MQ=255) ttGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGAc < 1:21140569/68‑1 (MQ=255) ttGCAGCAGAGTGGCAAAAAATCCGCAGGGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGAc < 1:33208184/68‑1 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:32814685/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:2477860/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:12156752/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCGGACg > 1:698272/1‑68 (MQ=255) gcagcaGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGa > 1:18256221/1‑68 (MQ=255) gcagcaGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGa > 1:6707567/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:27901934/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:382931/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:25724856/1‑68 (MQ=255) cagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGa > 1:17934098/1‑64 (MQ=255) cagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:1847371/1‑68 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTGTACCTGACGATAgg > 1:15686327/1‑67 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:10037392/1‑67 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:28577908/1‑67 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:34100424/1‑67 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:338809/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:5655202/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:25559362/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:22871626/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:20868659/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:30522057/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTATACCTGACGATAggg < 1:24461380/65‑1 (MQ=255) ggCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTaa < 1:12377565/68‑1 (MQ=255) ggCAAAAAATCCGCAGTGGGCCGTGGAATAACCAGATGCCCTATCCTCTACCTGACTATAGGGCTTaa > 1:7668578/1‑68 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg > 1:27634107/1‑67 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg > 1:29027473/1‑67 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:32419183/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:317355/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:13915197/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:9839339/68‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:154815/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:31991749/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:5249234/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:14334825/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:24957569/67‑1 (MQ=255) gTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg > 1:22431468/1‑67 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:23888490/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:21916197/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:13669537/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac > 1:18932218/1‑67 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:30738220/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGAGTAAAGACAGGAAATGTTATGGATGac < 1:8927512/67‑1 (MQ=255) gAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAg < 1:28857882/49‑1 (MQ=255) aTAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCa > 1:12714879/1‑68 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:28185050/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:10846328/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:29341105/68‑1 (MQ=255) tAACCCGATGCCCTATCGGCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:29821382/68‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGCCACCAGCCg > 1:10193034/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:15810132/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:720337/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:1965843/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:19866511/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:31043832/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:16146139/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:17020923/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:21662005/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:34423713/1‑68 (MQ=255) tGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAc > 1:8325011/1‑67 (MQ=255) GCCCTATCGTCTACCTGCCGATAGGGCGTAAAGACAGGAAATGTTATGGATGCACCCCGCCGGGAc < 1:14790566‑M1/66‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:21340963‑M1/68‑1 (MQ=255) | GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |