| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 499 (1.200) | 22 (0.070) | 9/90 | NT | 6.2% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 263 (0.790) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 593 total aligned reads displayed.
AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 | gtcccggctggtgtcatccataacatttcctgtctttacgccctatcgtcaggtagacgatagggcg < 1:28901184‑M2/1‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCTGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:1633641/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:22871626/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:29930599/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGt > 1:30473943/1‑68 (MQ=255) ggCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTaa < 1:12377565/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg < 1:8308905/67‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:25463033/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:6889470/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:1672726/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:25642915/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:23641653/68‑1 (MQ=255) aaTCCGCAGTGGGCGGTGGAATAACCCGAAGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAgg > 1:18601778/1‑68 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa > 1:30805804/1‑68 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:31797259/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:26290533/68‑1 (MQ=255) gtcatccataacatttcctgtctttacGCCCTATCGTCGACCGGCCGGTAGGGCGTAAAGACAGGaaa < 1:28490278‑M1/41‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:10195377/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:10038010/68‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt > 1:5184661/1‑68 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:15503701/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:31991749/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:1983007/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:21015881/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCAATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:5725663/67‑1 (MQ=255) gggCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt < 1:29790920/65‑1 (MQ=255) ataacatttcctgtctttacGCCCTATCGTCTCCCTGACGATAGGGCGTAAAGACAGGTAATGTTATg < 1:20674735‑M1/48‑1 (MQ=255) taacatttcctgtctttacgccctatcgccaggtagacgatagggcGTAAAGACAGGAAATGTTATgg < 1:34393172‑M2/22‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:22031571/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:30611471/67‑1 (MQ=255) acatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACTGGATATGTTATGgag < 1:31052297‑M1/51‑2 (MQ=255) acatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGAt < 1:15746538‑M1/51‑1 (MQ=255) acatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGAt < 1:23993673‑M1/51‑1 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg < 1:27334298‑M1/52‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:31338722/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:12758258/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac > 1:18932218/1‑67 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:21495703/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac > 1:8548870/1‑67 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGAGTAAAGACAGGAAATGTTATGGATGac < 1:8927512/67‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:13597555/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:28185050/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg > 1:4306842/1‑67 (MQ=255) aCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGcc > 1:32502590/1‑68 (MQ=255) ctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg < 1:21290422‑M1/62‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:1592287/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:5361348/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:34048912/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:29207334/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAAGTTATGGATGACACCAGCCg > 1:14418186/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACCCCAGCCgg > 1:32271605/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:21662005/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:5936893/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:2662543/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:17708398/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:25119329/1‑68 (MQ=255) cGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAc < 1:24917323‑M1/66‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:18076070‑M1/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:20427330‑M1/68‑1 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:3729365‑M1/1‑68 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:31595555‑M1/1‑68 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:27855498‑M1/1‑68 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:24184299‑M1/1‑68 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:17030570‑M1/1‑68 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:23730909‑M1/1‑68 (MQ=255) CTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGc > 1:29487772‑M1/1‑68 (MQ=255) ATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCaa < 1:23226592‑M1/68‑1 (MQ=255) cggcTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:26865276/65‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCCGCCGGGACCCGGCAATa < 1:1051448‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:33583200‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa > 1:11904234‑M1/1‑68 (MQ=255) CGTCTACCTGACGACAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:17347633‑M1/68‑1 (MQ=255) TCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATaa < 1:20046149‑M1/67‑1 (MQ=255) TCTACCTGACGATAGGGCGGAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATaa < 1:27482307‑M1/67‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:23373892‑M1/68‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:19456935‑M1/68‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:33258831‑M1/68‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:22456411‑M1/68‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:13382230‑M1/68‑1 (MQ=255) acatGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCAGGGAAACGGCAATAACCGa > 1:28740628/4‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGTAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:19690402/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAGCCGa > 1:1104144/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:15208565/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:4703857/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:24668776/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:27197814/1‑68 (MQ=255) cTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAg > 1:11388111/1‑68 (MQ=255) tGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGa > 1:9791383/1‑68 (MQ=255) tGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGa < 1:7557152/68‑1 (MQ=255) tGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGa < 1:7333365/68‑1 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:7977096‑M2/60‑1 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:6419360‑M2/8‑68 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGAGGaaa > 1:25905759‑M2/8‑68 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:13842333‑M2/61‑1 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:19170681‑M2/61‑1 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:32720266‑M2/61‑1 (MQ=255) agggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATc > 1:14760714‑M2/6‑68 (MQ=255) agggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATc > 1:9278796‑M2/6‑68 (MQ=255) gggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCa > 1:14172545‑M2/5‑68 (MQ=255) ggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg > 1:5786649‑M2/4‑68 (MQ=255) | AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |