New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =338 (0.820)18 (0.050) 7/100 NT 5.5% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 316 (0.850)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 445 total aligned reads displayed.

GGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108705‑108835
                                                               |                                                                   
acctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 <  1:33792510‑M1/5‑1 (MQ=255)
 gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:30550332/1‑67 (MQ=255)
 gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 <  1:22425458/67‑1 (MQ=255)
 cctggtttggcctgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:14356940‑M1/63‑66 (MQ=255)
 cctggattggcgtgcctggcgtgtaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:26829779‑M1/63‑66 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:31360002‑M1/6‑1 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:6275620‑M1/6‑1 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:15915779‑M1/6‑1 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 >  1:11144011‑M1/63‑67 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 >  1:15642286‑M1/63‑67 (MQ=255)
 cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:24877844‑M1/63‑66 (MQ=255)
   tGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgc                                                               <  1:26004038/67‑1 (MQ=255)
      tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:19738726/1‑68 (MQ=255)
      tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:33124304/67‑1 (MQ=255)
      tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:659565/67‑1 (MQ=255)
       cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:4541428/68‑1 (MQ=255)
       cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:31953525/68‑1 (MQ=255)
       cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:28748343/68‑1 (MQ=255)
       cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:15793080/68‑1 (MQ=255)
       cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:12536277/68‑1 (MQ=255)
           cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:20426595/66‑1 (MQ=255)
           cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:9221392/66‑1 (MQ=255)
           cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:24013148/1‑68 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:29845544/1‑63 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:22567464/1‑66 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:21379096/1‑66 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:1321605/1‑66 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:12682955/1‑66 (MQ=255)
                aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:11885266/1‑66 (MQ=255)
                  gCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTc                                               <  1:4291481/68‑1 (MQ=255)
                    aCCAGAGCAATCAAACGATGTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:18981134/1‑67 (MQ=255)
                    aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              <  1:25763828/67‑1 (MQ=255)
                    aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:31064585/1‑67 (MQ=255)
                      cAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcccc                                            >  1:4109680/1‑67 (MQ=255)
                         agCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:29271985/1‑67 (MQ=255)
                          gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:27978555/1‑66 (MQ=255)
                          gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       >  1:16002157/1‑68 (MQ=255)
                            aaTCTAACTATCTTCACGCAGAAATTGCCCGATACGCCGAGCGGAAATTAATACGCTCCCcgccgc                                       <  1:30211946/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:29514858/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:26460168/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:31162476/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:10514614/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:17628668/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:20990078/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:11327725/66‑1 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                     >  1:33589763/1‑68 (MQ=255)
                            aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                     >  1:25909752/1‑68 (MQ=255)
                             aTCAAACGATCTTCCCGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtat                                    <  1:19413882/68‑3 (MQ=255)
                             aTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCttt                                    <  1:11616744/68‑1 (MQ=255)
                              agccgtattgaagcgttaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCtttt                                   <  1:9361369‑M1/35‑1 (MQ=255)
                               gccgtattgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  <  1:14943417‑M1/36‑1 (MQ=255)
                               cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:28922081/1‑68 (MQ=255)
                               cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:21126092/1‑68 (MQ=255)
                                 aaCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:1531030/1‑66 (MQ=255)
                                 aaCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:23145765/1‑66 (MQ=255)
                                  aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:7336785/68‑1 (MQ=255)
                                  aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:11403818/68‑1 (MQ=255)
                                    gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:30695669/68‑1 (MQ=255)
                                    gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:27007594/1‑66 (MQ=255)
                                    gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:7089660/1‑66 (MQ=255)
                                    gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:28089854/1‑66 (MQ=255)
                                       cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                          <  1:2003560/68‑1 (MQ=255)
                                        ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:10048457/68‑1 (MQ=255)
                                        ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:3256763/68‑1 (MQ=255)
                                        ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:18010026/68‑1 (MQ=255)
                                        ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:8179900/68‑1 (MQ=255)
                                        ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:22663699/68‑1 (MQ=255)
                                         agcattaattcagcagttaaaaGCGGCGCGGAATTTAATACGCTCCCCGCCGCTGTTTACGGCTGAAt                        <  1:22890973‑M1/46‑1 (MQ=255)
                                         agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGGTGAAt                        <  1:34191162‑M1/46‑1 (MQ=255)
                                         agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:27291518‑M1/46‑1 (MQ=255)
                                         agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:20847838‑M1/46‑1 (MQ=255)
                                             gCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAAt                    >  1:16564842/1‑68 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGc                  <  1:17461175/65‑1 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:17729594/66‑1 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:13490086/66‑1 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:12204265/66‑1 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:18106309/66‑1 (MQ=255)
                                                  aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:4928212/66‑1 (MQ=255)
                                                     tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:8734562/68‑1 (MQ=255)
                                                     tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:34004108/68‑1 (MQ=255)
                                                       cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:3883771/1‑68 (MQ=255)
                                                       cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:978898/1‑68 (MQ=255)
                                                       cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:24536374/1‑68 (MQ=255)
                                                        ccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACg         <  1:34394382/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:3574190/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:18313581/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:18673648/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:22152081/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:23575781/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:23659984/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:5613823/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:27706171/68‑1 (MQ=255)
                                                          gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:32771503/68‑1 (MQ=255)
                                                            tACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGct      <  1:14060157/67‑1 (MQ=255)
                                                             aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:29691444/1‑65 (MQ=255)
                                                             aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:21704318/1‑65 (MQ=255)
                                                               GCGGCGCGGAAATTAATACGCTCCCCTCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:16321228‑M1/1‑68 (MQ=255)
                                                               GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:25066170‑M1/68‑1 (MQ=255)
                                                               GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:7889104‑M1/1‑68 (MQ=255)
                                                               GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:30025507‑M1/1‑68 (MQ=255)
                                                               |                                                                   
GGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108705‑108835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.