| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 334 (0.810) | 31 (0.090) | 10/90 | NT | 9.2% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 343 (1.030) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 687 total aligned reads displayed.
ATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442617‑442749 | aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:2255409/68‑1 (MQ=255)aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:34481605/68‑1 (MQ=255) cctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTGCGCGgctgt < 1:6288420‑M1/14‑3 (MQ=255) gCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATc > 1:6757634/1‑68 (MQ=255) catgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTGCGCCGCTATCGAAc < 1:1734127‑M1/19‑1 (MQ=255) aTAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAc < 1:2941759/68‑1 (MQ=255) tAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAcc > 1:33712257/1‑68 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGt > 1:11519814/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCggat > 1:9312950/1‑66 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg < 1:25080491/66‑1 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:22968032/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:24119586/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:21120808/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:25007860/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:25609730/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:10647883/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:28242797/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:11251517/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:8106378/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGAAAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgt > 1:17518808‑M1/1‑51 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:10381674/67‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:3919863/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:18135963/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:26228214/68‑1 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGACCTCCCCCGTTACCGc > 1:33050862/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:4887051/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:683259/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:16897030/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:20355288/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:19897479/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTAACGAACACACCGGTTACCGc > 1:13348827/1‑68 (MQ=255) ggCATCTGCCACAGGCCGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGACCTCACCGGTTACCGc > 1:1448651/1‑68 (MQ=255) cATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGca < 1:12300187/67‑1 (MQ=255) cATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGca < 1:19698420/67‑1 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGGACTCACCGGTTACCGcaca > 1:21973056/1‑68 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGcaca < 1:30974915/68‑1 (MQ=255) tGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGGTACCGCACAGTa < 1:15456797/68‑1 (MQ=255) gCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTa > 1:26477046/1‑67 (MQ=255) gCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTa > 1:10012998/1‑67 (MQ=255) cacaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGc < 1:20666074/67‑1 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:20126355/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:30312173/1‑68 (MQ=255) aGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGa > 1:27418511/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:9617280/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:12713294/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:14136797/1‑67 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggttaccggtgagttcgatagcg > 1:26078213‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcg > 1:1095374‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcg > 1:23480987‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcgggggtcggctactgtgcggtaaccggtgagttcgatagcg > 1:30488875‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:13835107‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:31430896‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:29088808‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:2975452‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:26953630‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:2461928‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:33351500‑M2/68‑4 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAACGCACAGTAGCCGATCACCGgcg < 1:25869250‑M2/67‑4 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:22676940‑M2/1‑63 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:18817934‑M2/1‑63 (MQ=255) cagcagGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca < 1:2780664‑M2/67‑9 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCTGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:18322745‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:31597179‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:25415859‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:26687767‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:22275879‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:21442869/67‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:7632325/67‑1 (MQ=255) acgATCGCTGCGCCGCTATAGAACTCACCGGGTTCCCCCCAGTAGCCGATCACCGGCGGCGCAgcgc < 1:14861310/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCCCCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCgg < 1:32033857/67‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:1646783/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:30765564/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga > 1:28662596/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCCCAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:16626312‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:4287172‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:34243037‑M1/1‑68 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgattgcggcgcagcgatcct > 1:8413534‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:24882351‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:523316‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:1622143‑M1/1‑10 (MQ=255) GCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:11651291‑M1/67‑1 (MQ=255) tGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctg > 1:10225767‑M1/1‑8 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGcgcg < 1:8728972‑M1/68‑1 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCg < 1:34052441‑M1/68‑1 (MQ=255) gcgcCGCcggtgatcggcttctgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggc < 1:5503894‑M1/68‑62 (MQ=255) cgccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggc < 1:6555381‑M1/67‑62 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:24236222‑M1/1‑5 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:19339435‑M1/1‑5 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:7168989‑M1/1‑5 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:32716522‑M1/1‑5 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:13002550‑M1/1‑5 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:4594876‑M1/67‑1 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:32856776‑M1/67‑1 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:15941557‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:15709032‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagctcgatagcggcgcagcgatcctgctggctatc < 1:23737832‑M1/68‑66 (MQ=255) cgcTAACGAACTCACCGGTTACCGCACATTAGCCGATCACCGgcggcgcagcgatcctgctggctatc > 1:15056834‑M2/1‑42 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAAcc > 1:5644950‑M1/1‑67 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAAcc > 1:495955‑M1/1‑67 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCa > 1:29979607‑M1/1‑68 (MQ=255) | ATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442617‑442749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |