| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 334 (0.810) | 31 (0.090) | 10/90 | NT | 9.2% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 343 (1.030) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 691 total aligned reads displayed.
GAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCT > CP009273/442655‑442789 | aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc > 1:24201704‑M2/1‑66 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:33591422‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:21201990‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTAAACGGTTACCGCAAAGTAGCCGATCACCGgcg < 1:22597920‑M2/68‑4 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:14722521‑M2/1‑63 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:32716522‑M2/1‑63 (MQ=255) ctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcg < 1:16763353‑M1/61‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:24882351‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:11894180‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:7632325/67‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:26236877/67‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:29883278/67‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGAGCCCCGgcggcgcagc > 1:7966803‑M2/1‑55 (MQ=255) ggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga < 1:12754781‑M1/66‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:1646783/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga > 1:16014910/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:1112451‑M1/68‑1 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:9242442‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:3470035‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:15704302‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:6623563‑M1/68‑1 (MQ=255) GCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:26715205‑M1/67‑1 (MQ=255) GCTGCGCCGATATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:5328667‑M1/67‑1 (MQ=255) GCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGa < 1:25073407‑M1/68‑1 (MQ=255) GCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGa < 1:1854600‑M1/68‑1 (MQ=255) ggCGCTATCGAACTCACCGGTTACCGCACATTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa > 1:15015685‑M1/3‑67 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGCGCGaa < 1:33192940‑M1/67‑1 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:712128‑M1/67‑1 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:26902235‑M1/67‑1 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:11539873‑M1/67‑1 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCCGCGGCGCAGCGCCGGAGAGCgac < 1:28546954‑M1/67‑2 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:8479006‑M1/1‑68 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctggctatcttcagcct > 1:20526092‑M2/1‑33 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCACCGt > 1:981272/1‑67 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt < 1:19725511/67‑1 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt < 1:1777657/67‑1 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt > 1:4826474/1‑67 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctggctatcttcagcctgt > 1:14031088‑M2/1‑32 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGATTGCGAACCAATCAACGTGc < 1:1628751/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:25949981/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:32255004/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:25704386/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:25466556/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:31353415/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:30851229/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:23998403/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:5040932/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:21482977/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:19456073/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:33947198/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:8255350/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:13464971/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:8827504/68‑1 (MQ=255) tCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGcc > 1:19070553/1‑68 (MQ=255) aCCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGt < 1:29564935/68‑1 (MQ=255) aCCGGTTACCGCACAGTAGCCGATCACCAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGt < 1:6865372/68‑1 (MQ=255) ggTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAg > 1:3630196/1‑67 (MQ=255) ggTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAg > 1:5954445/1‑67 (MQ=255) gtaCCGCACCGTCGCCGAGCCCCGgcggcgcagcgagcctgctggctatcttcagcctgtggcagat > 1:10460160‑M2/2‑24 (MQ=255) tACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGCGCGAACCAATCAACGTGCCGTAGACag > 1:10816003/1‑68 (MQ=255) tACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACag > 1:27621151/1‑68 (MQ=255) tACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACag > 1:32443447/1‑68 (MQ=255) tACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACa < 1:10226907/67‑1 (MQ=255) aCCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACaga < 1:12267735/68‑1 (MQ=255) cGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGt < 1:22185743/68‑1 (MQ=255) cGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGt < 1:30148455/68‑1 (MQ=255) gCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGCCAGAGTg > 1:11378654/1‑68 (MQ=255) acaGTAGCCGATCACCGgcggcgcagcgatcctgctggctttcttcagcctgtggcagatgcctcact > 1:17518808‑M2/1‑17 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc > 1:30714627/1‑68 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc > 1:27350052/1‑68 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc > 1:31621560/1‑68 (MQ=255) aGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGt < 1:31037781/68‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCg < 1:17313751/64‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:13061788/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:28055925/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:32872628/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:20210526/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:5824073/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:21817253/67‑1 (MQ=255) gCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCa > 1:30450070/1‑68 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATg < 1:10035576/68‑1 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCgtgt > 1:29444900/1‑67 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt > 1:25238833/1‑67 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt > 1:17011170/1‑67 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt > 1:34127280/1‑67 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt > 1:23322792/1‑67 (MQ=255) tCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTAc > 1:6430229/1‑68 (MQ=255) aCCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAg > 1:28737624/1‑68 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:5619643/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:23566533/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:18265090/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:44630/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:2642875/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:426304/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:15329772/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:13759968/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:31879048/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:9509317/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:22826598/68‑1 (MQ=255) cggcggCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGc < 1:29269947/68‑1 (MQ=255) | GAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCT > CP009273/442655‑442789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |