| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314847 = | 188 (0.450) | 9 (0.030) | 8/96 | NT | 5.6% | coding (795/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314933 = | 140 (0.390) | coding (709/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 298 total aligned reads displayed.
TGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGAATT > CP009273/1314780‑1314913 | tGATACTGTTGCTGCCGTCACCGCAAGTACCGCCGATATCAGCAAACAGATAATCCGGGGGCGGGAAc > 1:20109066/1‑68 (MQ=255) aacaagaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcg > 1:7413175‑M1/67‑68 (MQ=255) aacaagaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcg < 1:27521302‑M1/2‑1 (MQ=255) ttcTGTTGATGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACgg < 1:25430454/65‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:6968406/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:34318647/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:30328994/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:28946127/68‑1 (MQ=255) caagaaagcccccagctgttttcagcggtgttgcgtggcgagctgaagccggaacaactggcggcggc > 1:33462797‑M1/65‑68 (MQ=255) caagaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcggc < 1:10092696‑M1/4‑1 (MQ=255) caagaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcggc > 1:15467067‑M1/65‑68 (MQ=255) caagaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcggc > 1:6636846‑M1/65‑68 (MQ=255) caagaaagccaccagcggttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcggc > 1:11171665‑M1/65‑68 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGCACGgc > 1:21414512/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:28761489/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:28577812/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:28210234/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:31142010/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:23923621/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:9481599/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:17117185/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:12140071/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:13395227/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:16106153/1‑67 (MQ=255) agaaagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggcggc < 1:33741534‑M1/4‑1 (MQ=255) aagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggCGGCGCt > 1:10084186‑M1/60‑66 (MQ=255) aagccaccagctgttttcagcggtggtgcgtggcgagctgaagccggaacaactggcggCGGCGCTGc > 1:32510301‑M1/60‑68 (MQ=255) aagccaccagctgttttcagcggtggggcggggcgagctgaagccggaacaactggcggCGGCGCTg > 1:20973969‑M1/60‑67 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:6127487/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:12861059/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:5109269/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:18214600/1‑68 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:23063857/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:27996702/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:24934822/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:25063314/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:25295066/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:12367264/68‑1 (MQ=255) accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGt < 1:24463161‑M2/58‑1 (MQ=255) gccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgc > 1:8682308‑M2/7‑67 (MQ=255) gccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgc > 1:591380‑M2/7‑67 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:535174‑M2/6‑68 (MQ=255) cagtAGCGACGATATCAGCATACATATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGctcg < 1:29392608‑M2/64‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:16032892/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:30758486/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:19294859/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:19994386/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTtg < 1:1410274/68‑1 (MQ=255) ccGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:16434743/1‑66 (MQ=255) ggtgcgtggcgagctgaagccggaacaactggcgaCGGCGCTGCGTTTTCCAGTAGCGCGGTtgctgc > 1:2804176‑M1/36‑68 (MQ=255) cgaTATCCGCAATCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTtgctgc > 1:427425/1‑67 (MQ=255) cgaTATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTtgctgc > 1:3783020/1‑67 (MQ=255) cgaTATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTtgctgc > 1:7961448/1‑67 (MQ=255) cgaTATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTtgctgc > 1:11620782/1‑67 (MQ=255) atatCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGcccc > 1:1517490/1‑68 (MQ=255) tatCAGCAAACAGATAATCCGGGCGCGGGCACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCg > 1:18785318/1‑68 (MQ=255) tCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGc < 1:14439580/68‑1 (MQ=255) tCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGc < 1:893380/68‑1 (MQ=255) tCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGc > 1:13750474/1‑68 (MQ=255) aGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGa > 1:2158667/1‑68 (MQ=255) cAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGa > 1:16718296/1‑66 (MQ=255) aaaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGa < 1:30043071/65‑1 (MQ=255) aaaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAt < 1:7758643/66‑1 (MQ=255) aaaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAt < 1:19744792/66‑1 (MQ=255) aaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAtctc > 1:32980467/1‑68 (MQ=255) aaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAtctc > 1:2041181/1‑68 (MQ=255) aaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAtctc < 1:18397268/68‑1 (MQ=255) aaCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGAtctc < 1:21201716/68‑1 (MQ=255) cAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGt > 1:3224711/1‑68 (MQ=255) gATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTc > 1:10397330/1‑68 (MQ=255) gATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTc > 1:15766544/1‑68 (MQ=255) gATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTc > 1:3176229/1‑68 (MQ=255) tAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCg < 1:14942294/67‑1 (MQ=255) tAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCg < 1:26229518/67‑1 (MQ=255) tAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCg < 1:34087606/67‑1 (MQ=255) aaTCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCggg < 1:27074914/68‑1 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCGGGCGATCTCGTTCGGGt > 1:8116570/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:18932522/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:15871405/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:8730601/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:8484155/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:26345281/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:7584461/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:10151947/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:22335526/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:32736822/1‑67 (MQ=255) tCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:23582580/1‑67 (MQ=255) ccGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGt > 1:27759298/1‑66 (MQ=255) cGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGc > 1:26638187/1‑67 (MQ=255) cGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGc > 1:25804573/1‑67 (MQ=255) gcgcGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCa < 1:17415449/67‑1 (MQ=255) gcgcGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCa < 1:31543984/67‑1 (MQ=255) cgcgGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCAcc > 1:4935964/1‑68 (MQ=255) cgcgGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCAcc > 1:26998404/1‑68 (MQ=255) gcgGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCAcc < 1:21922022/67‑1 (MQ=255) gcgGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCAcc < 1:20608244/67‑1 (MQ=255) gAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGa < 1:11806578/67‑1 (MQ=255) aCGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGAAtt > 1:24761732/1‑68 (MQ=255) aCGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGAAtt < 1:24222705/68‑1 (MQ=255) aCGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGAAtt < 1:12517135/68‑1 (MQ=255) | TGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTGCTGCCCCGGCGATCTCGTTCGGGTGCTCACCGCGAATT > CP009273/1314780‑1314913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |