New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2416060 =329 (0.790)16 (0.050) 8/90 NT 5.4% coding (874/894 nt) yfcH putative NAD‑dependent nucleotide‑sugar epimerase
?CP009273 2416107 = 292 (0.880)intergenic (+27/+21) yfcH/yfcI putative NAD‑dependent nucleotide‑sugar epimerase/transposase_31 family protein

Only 100 of 425 total aligned reads displayed.

GCGCGCTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAGGA  >  CP009273/2415995‑2416127
                                                                 |                                                                   
gcgcgcTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTg                                                                   <  1:26144904/68‑1 (MQ=255)
 gacccgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTgg                                                                  >  1:20675821‑M1/65‑68 (MQ=255)
  gcgcTGCCTAACCGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTgg                                                                  <  1:29912100/67‑1 (MQ=255)
  gcgcTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTgg                                                                  <  1:32784005/67‑1 (MQ=255)
  gcgcGGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTgg                                                                  <  1:23539368/67‑1 (MQ=255)
  acccgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGc                                                                 <  1:17179699‑M1/5‑1 (MQ=255)
   cccgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGCg                                                                <  1:5107262‑M1/6‑1 (MQ=255)
   cccgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGCg                                                                <  1:25350602‑M1/6‑1 (MQ=255)
    ccgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGCgg                                                               <  1:18954282‑M1/7‑1 (MQ=255)
     cgactttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaacgggagttaaCTGGCGGa                                                              >  1:16291873‑M1/61‑68 (MQ=255)
      tGCCTAAACGGCTGGAAGAAGCGGGGTTTGCGTTTCGCTGGGACGATTTAGAAGAGGCGCTGGCGGa                                                              <  1:7207896/67‑1 (MQ=255)
        ctttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGCGGATg                                                            >  1:28631939‑M1/58‑67 (MQ=255)
        ctttcaccagacgatcttatcgcgcaaagccactaatcctgtaacaccgggagttaaCTGGCGGATGt                                                           >  1:1772152‑M1/58‑68 (MQ=255)
            aaCGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGt                                                        >  1:941877/1‑67 (MQ=255)
             aCGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      <  1:27181826/68‑1 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:14522116/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:10192952/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:6417911/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:12578065/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:22660934/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:4378016/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:11643655/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:31880466/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:34140799/1‑67 (MQ=255)
              cGGCTGGAAGAAGCGGG‑TTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:4661953/1‑66 (MQ=255)
                gCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:15600401/1‑65 (MQ=255)
                gCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTc                                                      >  1:4943050/1‑65 (MQ=255)
                 cTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTctct                                                   <  1:25885685/67‑1 (MQ=255)
                 cTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCt                                                   <  1:9136632/67‑1 (MQ=255)
                  tgtaagaagCGGGTTTTGCGTTTCGCTGTTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGa                                                 <  1:33748549/65‑1 (MQ=255)
                  tGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAG‑GGCGCTGGCGGATGTCGTTCGCTGa                                                 <  1:14293101/67‑1 (MQ=255)
                      agaagCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGAtgt                                              <  1:30384230/67‑1 (MQ=255)
                       gaagCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            >  1:25023412/1‑68 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGCGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:33422247/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:22215538/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:26908268/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:5289122/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:21437823/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:3491887/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTgg                                            <  1:12783283/66‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGt                                           <  1:11434803/67‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGt                                           <  1:12826880/67‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGt                                           <  1:1327474/67‑1 (MQ=255)
                         agCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGt                                           <  1:23794392/67‑1 (MQ=255)
                            gggTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCTCTGGCGGATGTCGTTCGCTGATGTGGttt                                         <  1:5493355/66‑1 (MQ=255)
                            gggTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTAc                                       <  1:18224213/68‑1 (MQ=255)
                              ggtttGCGTTTCGCTGGTACGATTTAGAAGCGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACa                                      <  1:6184617/65‑1 (MQ=255)
                                ttttCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGc                                    <  1:27890824/67‑1 (MQ=255)
                                   gCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAAc                                <  1:3990232/68‑1 (MQ=255)
                                   gCGTTTCGCTGGTAAGCTTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGCTGTGGTTTACAGCAAAc                                <  1:8797274/68‑1 (MQ=255)
                                      cactaatcctgtaacaccgggagttaaCTGGCGGATg                                                            >  1:33887040‑M1/28‑37 (MQ=255)
                                        tCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATcc                            >  1:7687637/1‑67 (MQ=255)
                                            tGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAg                       <  1:11802593/68‑1 (MQ=255)
                                             ggTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGt                      >  1:30800749/1‑68 (MQ=255)
                                             cctgtaacaccgggagttaaCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGt                      <  1:28412353‑M1/48‑1 (MQ=255)
                                               tgtaacaccgggagttaaCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTa                    <  1:21975110‑M1/50‑1 (MQ=255)
                                               tACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGtt                     <  1:10085854/67‑1 (MQ=255)
                                               tACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTa                    >  1:15982365/1‑68 (MQ=255)
                                                aCGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTa                    >  1:18797911/1‑67 (MQ=255)
                                                aCGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTa                    >  1:2976643/1‑67 (MQ=255)
                                                 taacaccgggagttaaCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTa                    <  1:417506‑M1/50‑1 (MQ=255)
                                                    tttAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTc                >  1:26606321/1‑67 (MQ=255)
                                                    tttAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTc                >  1:19280103/1‑67 (MQ=255)
                                                    tttAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTc                >  1:3723234/1‑67 (MQ=255)
                                                     ttAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTccc              >  1:7484547/1‑68 (MQ=255)
                                                      tAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCg             <  1:3594862/68‑1 (MQ=255)
                                                      tAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCg             <  1:12157295/68‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGGCAGTTAACTCCCGgtgt         >  1:16714413/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:25182873/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:7894027/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:17659129/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         <  1:14999760/68‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:13811489/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:14202669/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         <  1:6786201/68‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:8081986/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:21767226/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:24794015/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:24615924/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:2309390/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         <  1:28125114/68‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:29152401/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:29614539/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:21132968/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         >  1:3155000/1‑68 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtgt         <  1:32331352/68‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtg          <  1:19772881/67‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgtg          <  1:24119672/67‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgt           <  1:16837281/66‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgt           <  1:27333788/66‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgt           <  1:23302723/66‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgt           <  1:8220074/66‑1 (MQ=255)
                                                          agagGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGgt           <  1:32943720/66‑1 (MQ=255)
                                                             ggCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTa       <  1:17088132/67‑1 (MQ=255)
                                                             ggCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTAc      >  1:10376238/1‑68 (MQ=255)
                                                               cgcTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAg    >  1:29346690/1‑68 (MQ=255)
                                                                gcTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAgg   <  1:20924770/68‑1 (MQ=255)
                                                                gcTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAgg   <  1:10664481/68‑1 (MQ=255)
                                                                gcTGGCGGATGTCGTGCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAg    <  1:18023234/67‑1 (MQ=255)
                                                                 CTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAGGa  <  1:20286711‑M1/68‑1 (MQ=255)
                                                                 |                                                                   
GCGCGCTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGATGTGGTTTACAGCAAACATCCGCCAGTTAACTCCCGGTGTTACAGGA  >  CP009273/2415995‑2416127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.