| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2787742 = | 456 (1.100) | 33 (0.090) | 12/96 | NT | 8.1% | coding (131/1401 nt) | gabP | gamma‑aminobutyrate transporter |
| ? | CP009273 | 2787778 = | 356 (1.000) | coding (167/1401 nt) | gabP | gamma‑aminobutyrate transporter | |||||
Only 100 of 604 total aligned reads displayed.
TGTCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCG > CP009273/2787676‑2787809 | tgtCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCggg > 1:14816635/1‑67 (MQ=255)tgtCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCggg < 1:144975/67‑1 (MQ=255)tgtCTATTGCCGGGGTTATCGGCGCAAGTCTGTTTGTCGGGTCCAGCGGCGCCATCGCCGAAGCggg < 1:28095104/67‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:10690036‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:33581542‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:2499079‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:3657324‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:3851445‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtag < 1:4306154‑M1/1‑1 (MQ=255)acgaaccggtatcgggcgtggcaaccgccatttccgccaacatccgcaaaatcctaaccaccagtag < 1:6800939‑M1/1‑1 (MQ=255) cTATTGGCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcg > 1:8750674/1‑68 (MQ=255) cTATTGCCNGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcg > 1:2393709/1‑68 (MQ=255) cTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcg > 1:21236138/1‑68 (MQ=255) cTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcg > 1:33921052/1‑68 (MQ=255) cTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGAGTCGCCATCGACGAAGCGGGCCcg > 1:11110487/1‑68 (MQ=255) aTTGCGGGTGGTTTCCGCGCAAGTGTGTTTGTCGGTTGCAGCGTCGCCATCGCCGAAGCGGGGCcggc < 1:25342592/68‑1 (MQ=255) aTTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggc > 1:6433229/1‑68 (MQ=255) aTTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggc > 1:13257717/1‑68 (MQ=255) aTTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggc < 1:3110775/68‑1 (MQ=255) aTTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggc < 1:18223391/68‑1 (MQ=255) aTTGCCGGTGTTATCGGCGCAAGTCTGTTTGGCGGTTCCAGCGGCGCCATCGCCGAAGCGGGCCcggc < 1:543970/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCTCCATCGCCGAAGCGGGCCcggcg < 1:23651807/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:7028586/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:21588989/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:846651/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:12417617/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:28561312/68‑1 (MQ=255) ttGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcg < 1:32604990/68‑1 (MQ=255) cggtatcgggcgtggcaaccgccatttccgccaacatccgcataatcataaccaccagtaGCCcggcg > 1:33392219‑M1/61‑68 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCcggcgga > 1:1627042/1‑67 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt < 1:17942672/68‑1 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt < 1:32857512/68‑1 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt > 1:32047122/1‑68 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt < 1:11584707/68‑1 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt > 1:20812325/1‑68 (MQ=255) gCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGt < 1:5023193/68‑1 (MQ=255) cGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTa < 1:24650356/67‑1 (MQ=255) cGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAt > 1:30414511/1‑68 (MQ=255) ggggtTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:10793288/65‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:27567657/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:33841559/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:20059808/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:31360274/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:18620343/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:14219052/68‑1 (MQ=255) ggTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTAtt < 1:11247735/68‑1 (MQ=255) ttATCGGCGCAAGTCTGTTTGTCGGTTCCCGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTAGTg > 1:8967884/1‑68 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTgg < 1:34395256/68‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg > 1:29415170/1‑67 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:10335048/67‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:25247098/67‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:17505926/67‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:15685600/67‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:20462144/67‑1 (MQ=255) tATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTg < 1:21040714/67‑1 (MQ=255) aTCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGc < 1:22587393/68‑1 (MQ=255) aTCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGc < 1:7919104/68‑1 (MQ=255) tCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGcc < 1:2892719/68‑1 (MQ=255) cGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCTATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCt > 1:17057915/1‑68 (MQ=255) gcgcAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTa > 1:29275163/1‑67 (MQ=255) gcAAGTCTGTTTGTCGGTTCCATCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCt < 1:16048249/68‑1 (MQ=255) gcAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTa > 1:13568703/1‑65 (MQ=255) gcAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCt < 1:6098830/68‑1 (MQ=255) gcAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCt < 1:7250261/68‑1 (MQ=255) tCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTc > 1:5793151/1‑67 (MQ=255) tCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTc > 1:13914353/1‑67 (MQ=255) ttGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCggg < 1:21811206/68‑1 (MQ=255) ttGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCggg < 1:30680934/68‑1 (MQ=255) ttGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCgg > 1:19637098/1‑67 (MQ=255) ttGTCGGTGCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCggg < 1:22328402/68‑1 (MQ=255) gTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCt < 1:22906776/68‑1 (MQ=255) ccaacatccgcataatcataaccaccagtaGCCCGGCGGGATTACTGGCCTATCGGGTCGCCGggcga < 1:23073789‑M1/38‑3 (MQ=255) cGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTAc < 1:30121234/68‑1 (MQ=255) cGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTAc < 1:26106558/68‑1 (MQ=255) ggTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCt > 1:7592084/1‑65 (MQ=255) tCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggt < 1:31874336/68‑1 (MQ=255) atccgcataatcataaccaccagtaGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggt < 1:24164584‑M1/43‑1 (MQ=255) ccAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtg < 1:31690946/68‑1 (MQ=255) cAGCGTCGCCATCGCGGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:12147003/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:15412185/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:9373764/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:19103458/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:27032005/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:27803091/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:30808929/68‑1 (MQ=255) cAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACtggtgg < 1:18936029/68‑1 (MQ=255) cGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTa > 1:32348794/1‑68 (MQ=255) cGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTa > 1:10007453/1‑68 (MQ=255) gTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGtt < 1:2911799/66‑1 (MQ=255) ataatcataaccaccagtaGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTAt < 1:16877486‑M1/49‑1 (MQ=255) cGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATg < 1:4722063/67‑1 (MQ=255) cGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATg < 1:19453791/67‑1 (MQ=255) cGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATg < 1:17749283/67‑1 (MQ=255) ccATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGAtt > 1:16748513/1‑68 (MQ=255) ccaccagtaGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCgg < 1:13031046‑M1/59‑1 (MQ=255) ccaccagtaGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCgg < 1:29666567‑M1/59‑1 (MQ=255) aGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATg < 1:18442178/67‑1 (MQ=255) gCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGtt > 1:13951129/1‑68 (MQ=255) gCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGtt > 1:15519922/1‑68 (MQ=255) gggCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTgg < 1:12651482/68‑1 (MQ=255) | TGTCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCG > CP009273/2787676‑2787809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |