| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4523631 | 636 (1.650) | 3 (0.010) | 3/96 | NT | 0.56% | coding (240/258 nt) | yjhX | UPF0386 family protein |
| ? | CP009273 | = 4523644 | 522 (1.580) | coding (227/258 nt) | yjhX | UPF0386 family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4523557‑4523631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagctgaATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < CP009273/4523644‑4523579 ATCACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATC > 1:21720615/1‑68 CACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:22091767/1‑68 CACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:22055594/1‑68 tcaTTTATCTGTGATATGAATAGTGTAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTTTCGAG < 1:4410325/65‑1 ACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAG < 1:4245842/68‑1 CTTTTATCTGTGATATGAAAAGTGGAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:23045909/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTATCGATTATCGA > 1:13456089/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:27043521/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:27152711/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:28697650/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:21016143/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:6280268/1‑66 CTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:12363509/1‑66 TTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGA > 1:21430941/1‑65 TTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTG > 1:1585047/1‑68 TTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTG > 1:20934818/1‑68 TATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA > 1:4440611/1‑67 TATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA > 1:31510997/1‑67 TATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA > 1:22136790/1‑67 TATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA > 1:21526085/1‑67 ATCTGTGATATGAACAGTGCAGTGGGGTACTGTCATAGAAACTCTCCTTCGCTATTATCGAGCGGAtc < 1:23861117/68‑3 GTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAG > 1:20127532/1‑68 AGAAACTCTCCTTAGCGATTATCGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAG > 1:3151044/1‑68 AAACTCTCCTTAGCGATTATCGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTT > 1:25421359/1‑68 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:18013918/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:19808106/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:192377/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:2639390/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:27545017/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:16333460/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:13781139/1‑67 CGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACT > 1:1348312/1‑67 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:26168233/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:9632523/1‑68 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:2451886/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:24383479/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:5822033/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:7748314/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:9441738/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:21744995/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:12493860/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:15114622/68‑1 GAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC < 1:16451397/68‑1 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCAC > 1:5607656/1‑68 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:24379743/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:1178955/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:14073496/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:27284409/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:18637450/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTC > 1:19440534/1‑66 GCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTGTCTATGACAGTACACCACTTa > 1:25749310/1‑65 CTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT > 1:26176202/1‑68 TGAATAAAGTTCGCTCTCAGCTCGATAATCGCTAATGAGAGTTTCTTTGACAGTACACCACTTCACT < 1:18805470/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTT > 1:5443859/1‑68 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTT > 1:17042287/1‑68 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTT < 1:15541938/68‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:10212985/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:21740411/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:14817008/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:15538161/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:25785448/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACT < 1:27721216/67‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCAC < 1:19454522/66‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCAC < 1:26931425/66‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCAC < 1:4644414/66‑1 TGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCAC < 1:31670904/66‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:25617311/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:25508495/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:378139/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:30775157/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:12654879/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:17742838/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:6291391/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:6551301/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:23158422/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:10439708/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:9597336/68‑1 GAATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < 1:2828708/68‑1 ATCACTTTTATCTGTGATATGAAAAGTGAAGTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4523557‑4523631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagctgaATAAAGTTCGCGCTCAGCTCGATAATCGCTAAGGAGAGTTTCTATGACAGTACACCACTTCACTTT < CP009273/4523644‑4523579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |