| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4603957 | 233 (0.610) | 12 (0.040) | 7/94 | NT | 5.5% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 214 (0.660) | coding (673/780 nt) | yjjV | putative DNase | |||||
Only 100 of 124 total aligned reads displayed.
AAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4603882‑4603957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcctGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < CP009273/4603970‑4603905 AAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGG < 1:25463251/68‑1 AAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGG < 1:17736701/68‑1 AAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGG < 1:19559624/68‑1 AAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGG < 1:10681068/68‑1 AAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGG < 1:32041477/68‑1 AAATTACCGCTGGCAGCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGG < 1:12669101/68‑1 ATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGC > 1:8646452/1‑68 ATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGC > 1:7424607/1‑68 ttcCCGCTGGCATCGTTATTGCTGGAAACCGACTCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:399722/65‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:17723002/68‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:15305788/68‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:24546265/68‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:27995557/68‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:6881913/68‑1 TTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA < 1:4527859/68‑1 TACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAG < 1:22049592/68‑1 TACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAG < 1:6193768/68‑1 TACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCA > 1:26482213/1‑67 ACCGCTGGCATCGTTATTGCTGGAAACGGACGCGCCGGATAGGCCGCTCAACGGTTTTCAGGGGCAGC < 1:14538336/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:10302616/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:14961414/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:12114787/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:4591010/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:18948650/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:6048620/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:6147980/68‑1 ACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGC < 1:4042656/68‑1 CCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCC < 1:14526468/68‑1 CCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCC < 1:17114408/68‑1 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:23857195/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:21246175/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:1619874/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:17154899/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:29130494/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:11191013/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:28685153/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:2960150/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:15345632/1‑68 CGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT > 1:26750683/1‑68 TGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTGC < 1:12860790/67‑1 TGGCATCGTTATTGCTGGAAACCGACGCGCCCGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTGC < 1:6602835/67‑1 GTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTGAACGGTTTTCAGGGGCAGCCTGCTCCGGGCG < 1:29924008/68‑1 GCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTGCTCCGGGCGGTTAGG < 1:13264900/68‑1 ACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCg > 1:7687348/1‑67 TATGCCGCTCAACGGTTTTCAGGGGCCGCCGGCGCCGGGCGGTTAGTCTGCCCCTGACAACCGTggc > 1:28724516/1‑64 TGCCGCTCAACGGTTTTCAGGGGCAGCCTGCTCCGGGGGGTTAGGCTGCCCCTGAAAACCGTTGAGCG > 1:22159661/1‑68 TGCCGCTCAACGGTTTTCAGGGGCAGCCTGCTCCGGGCGGTTTGGCTGCCCCTGAAAACCGTTGAGCG > 1:21186791/1‑68 CCGCTCAACGGTTTTCAGGGGCAGCCTGGTCCGGGCGGTTAGGCTGCCCCTGAAACCCGTTGAGCGGC > 1:11143128/1‑68 CCGCTCAACGGTTTTCAGGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGC > 1:30922220/1‑68 CCGCTCAACGGTTTTCAGGGGAAGCCTGCTCCGGGGGGTTTGGGTGCCCCGGAAGACCGTTGAGCGGC > 1:29185818/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGATAGCCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:23529556/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAACGCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:20760791/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:4294835/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:17232028/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:15200249/1‑68 GGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGT > 1:10507466/1‑68 GGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTT < 1:23747815/68‑1 GGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTT > 1:8873864/1‑68 GGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTT > 1:25222709/1‑67 GGCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTT > 1:5846106/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:31421324/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:4353450/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:6450963/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:8516451/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:9591865/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:19176334/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:14788293/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:11094676/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:22256591/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:22672064/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTT > 1:24577517/1‑67 GCAGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATC > 1:21244016/1‑53 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:374134/1‑68 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:18257363/1‑68 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:12867386/1‑68 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:24186469/1‑68 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:30744215/1‑68 AGCCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA > 1:10237168/1‑68 CCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC > 1:14791566/1‑68 CCTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC > 1:889849/1‑68 CTGCTCCGGGCGGTTAGGCTTCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAG < 1:12508966/66‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGTGCGGCATATCCGGCGCGTCGGTTTCCAGC < 1:12488015/67‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < 1:28553578/68‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < 1:6908242/68‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < 1:8810545/68‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < 1:31073907/68‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < 1:30027876/68‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA > 1:29253373/1‑68 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC < 1:17401426/67‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC < 1:20480421/67‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC < 1:31293670/67‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGC < 1:10111807/67‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAG < 1:18112762/66‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAG < 1:1246374/66‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAG < 1:25012397/66‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA < 1:4747577/65‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA < 1:4514360/65‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA < 1:24625640/65‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCA < 1:25543896/65‑1 CTGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCAGGCGCGTCGGTTTCCA < 1:13323489/65‑1 AAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4603882‑4603957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagcctGCTCCGGGCGGTTAGGCTGCCCCTGAAAACCGTTGAGCGGCATATCCGGCGCGTCGGTTTCCAGCA < CP009273/4603970‑4603905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |