| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4603957 | 233 (0.610) | 12 (0.040) | 7/94 | NT | 5.5% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 214 (0.660) | coding (673/780 nt) | yjjV | putative DNase | |||||
Only 100 of 321 total aligned reads displayed.
ATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGC > CP009273/4603903‑4604037 | aTTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGc < 1:22287303/68‑1 (MQ=255) gCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCagg > 1:14791566‑M2/1‑65 (MQ=255) gCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCag < 1:10111807‑M2/67‑3 (MQ=255) gCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCag < 1:18861792‑M2/67‑3 (MQ=255) gCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCag < 1:20480421‑M2/67‑3 (MQ=255) cTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCag < 1:1246374‑M2/66‑3 (MQ=255) cTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGAAGCCTAACCGCCCGGAGCag < 1:12508966‑M2/66‑3 (MQ=255) cTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTACAGGGGCAGCCTAACCGCCCGGAGAAg > 1:24903168/1‑66 (MQ=255) tGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggct > 1:18257363‑M2/1‑63 (MQ=255) tGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggct > 1:12867386‑M2/1‑63 (MQ=255) aaaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgc > 1:4353450‑M2/1‑60 (MQ=255) aaaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgc > 1:22672064‑M2/1‑60 (MQ=255) aaaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgc > 1:8516451‑M2/1‑60 (MQ=255) aaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgccc > 1:8873864‑M2/1‑59 (MQ=255) aaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgcc > 1:5846106‑M2/1‑59 (MQ=255) aaCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgcc > 1:24376865‑M2/1‑59 (MQ=255) aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgcccc > 1:15200249‑M2/1‑58 (MQ=255) aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgcccc > 1:17232028‑M2/1‑58 (MQ=255) aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:3945648/1‑68 (MQ=255) aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:10566871/1‑68 (MQ=255) cGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCgtg < 1:9105000/68‑1 (MQ=255) gACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCgtgt < 1:18537690/68‑1 (MQ=255) cgcgCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCgtgtg < 1:6827617/67‑1 (MQ=255) cgcgCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCgtgtg < 1:6266380/67‑1 (MQ=255) cccgccgGATATGCCGCTCCACGGGTTTCAGGGGCAGCCTAACCGCCCGGAGCaggctgcccctgaaa > 1:20709131‑M2/3‑53 (MQ=255) cGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGc < 1:29164729/67‑1 (MQ=255) cGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGc < 1:21429374/67‑1 (MQ=255) tatGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGc < 1:17028617/68‑1 (MQ=255) tatGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGc < 1:21526257/68‑1 (MQ=255) tatGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGc < 1:14426151/68‑1 (MQ=255) tatGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGc < 1:28545271/68‑1 (MQ=255) atGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCt < 1:16230712/68‑1 (MQ=255) atGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCt < 1:23106752/68‑1 (MQ=255) tGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCtt > 1:10290400/1‑68 (MQ=255) cgcCGCTCAACGGTGTTCAGGGGCAGCCAAACCGCCCGGAGCaggctgcccctgaaaaccgttgagcg > 1:699907‑M2/2‑42 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:27695393/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:14006041/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:11074217/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:26991097/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:11943111/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:25278539/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:15368049/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:542629/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:22104809/1‑67 (MQ=255) cGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGc > 1:13797349/1‑68 (MQ=255) cGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGc > 1:20858136/1‑68 (MQ=255) cGCTCAACGGTTTTCAGGGGCAGCCAAACCGCCCGGAGCaggctgcccctgaaaaccgttgagcggca > 1:21186791‑M2/1‑39 (MQ=255) gCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCg > 1:4263765/1‑68 (MQ=255) tCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGa < 1:27518548/67‑1 (MQ=255) gccacggTTGTCAGGGGCAGACTAACCGCCCGGCGCcggcggcccctgaaaaccgttgagcggcata > 1:28724516‑M2/4‑36 (MQ=255) ttttCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTgcgc < 1:31529303/67‑1 (MQ=255) tttCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCg > 1:17904024/1‑68 (MQ=255) tCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCggg > 1:12234877/1‑68 (MQ=255) tCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCggg > 1:29654289/1‑68 (MQ=255) tCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCggg > 1:19019185/1‑68 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:23811343/1‑67 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:1084583/1‑67 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:11154896/1‑67 (MQ=255) ggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg > 1:24103628/1‑68 (MQ=255) ggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg > 1:13582087/1‑68 (MQ=255) ggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg > 1:44803/1‑68 (MQ=255) gCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg < 1:30328056/67‑1 (MQ=255) gCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg > 1:28374650/1‑67 (MQ=255) gCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg > 1:24619989/1‑67 (MQ=255) gCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg < 1:23382046/67‑1 (MQ=255) aGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTGCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggc < 1:6043512/67‑1 (MQ=255) aGCCTAACCCCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggc < 1:4717643/67‑1 (MQ=255) ccTAACCGCCCGGAGCaggctgcccctgaaaaccgttgagcggcatatccggcgcgtcggtttccagc < 1:13264900‑M2/68‑53 (MQ=255) cTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcgg < 1:30180260/66‑1 (MQ=255) cTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcgg < 1:11403351/66‑1 (MQ=255) cTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcgg < 1:28159806/66‑1 (MQ=255) cTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcgg < 1:18139521/66‑1 (MQ=255) cTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGAt > 1:15858838/1‑68 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:26759767/68‑1 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag > 1:30699955/1‑68 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag > 1:25863613/1‑68 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:19554824/68‑1 (MQ=255) ccGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgaga > 1:26013107/1‑68 (MQ=255) ccGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgaga < 1:7669738/68‑1 (MQ=255) cGCCCGGAGCaggctgcccctgaaaaccgttcagcggcatatccggcgcgtcggtttccagcaataac < 1:29924008‑M2/68‑59 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:20164458/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:147280/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:14241091/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:23551704/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:19829136/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:31638956/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:19374020/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:30979210/1‑68 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc < 1:9567283/68‑1 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc > 1:11633218/1‑68 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc < 1:27844220/68‑1 (MQ=255) ccGGAGCAGGCCGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc < 1:24225429/68‑1 (MQ=255) cGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgcg < 1:13443256/68‑1 (MQ=255) gCaggctgcccctgaaaaccgttgagcggcatatcgggcgcgtcggtttccagcaataacgatgcca < 1:6602835‑M2/67‑66 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa < 1:11204623/67‑1 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:16375009/1‑67 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa < 1:7294650/67‑1 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:7819440/1‑67 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:31323733/1‑67 (MQ=255) cAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGc > 1:11318652/1‑68 (MQ=255) | ATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGC > CP009273/4603903‑4604037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |