| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 403544 | 424 (1.100) | 23 (0.070) | 9/96 | NT | 5.2% | coding (661/678 nt) | aroM | AroM family protein |
| ? | CP009273 | = 403571 | 472 (1.430) | intergenic (+10/‑62) | aroM/yaiE | AroM family protein/UPF0345 family protein | |||||
CATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/403472‑403544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggctgTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG < CP009273/403571‑403505 CATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGC < 1:22119546/67‑1 TCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGG < 1:23730609/68‑1 CGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGC < 1:26069808/68‑1 CGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGC < 1:30957510/68‑1 CGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGC < 1:3157252/68‑1 CGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:29709530/1‑66 CGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:5545153/1‑66 CGCGAATTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:24887463/1‑66 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCT < 1:551938/68‑1 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCT < 1:9158394/68‑1 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:11092421/1‑65 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:27586013/1‑65 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:17168275/1‑65 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTG > 1:1828764/1‑65 GCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCAAGGCTG > 1:18053168/1‑65 CGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCT > 1:2805361/1‑67 CTTGCTGTCTAACGTATTGATTGCACGGCTGGCTGGCACGCAAAATTTCCCCAGGAATTGCGCAGCCc > 1:7457583/1‑67 TGCTGTATAAAGTATTTATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAG > 1:13497790/1‑67 TGTCTAACGTATTGATTGCACGGCTGGCTGTCCCGCAAAATTACCCCAGTAATTACGCAGCCAGCCGg > 1:2197531/1‑67 TGTCTAACGTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCCGGCGT > 1:10098766/1‑68 TGTCTAACGTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGT > 1:30071730/1‑68 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTATTTCCGCAGCCAGCCGTGCAATCAg > 1:29005175/1‑67 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAA > 1:157097/1‑68 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAA > 1:4286501/1‑68 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAA > 1:2226026/1‑68 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAA > 1:22469151/1‑68 GTATTGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAA > 1:5114189/1‑68 ATTGATTGCACGGCTGGCTGTCACGCAAAATTTCCCCAGTAAGTCCGCAGCCAGCCGTGGAATCAAT > 1:17535143/1‑67 TGATTGCACGGCTGGCTGTCCCGCAAAATTACACCAGTTATTCCGCAGCCAGCCGTGCAATCAATACG > 1:7446787/1‑68 TGATTGCACGGCTGGCTGTCCCGCAAAATTACACCACTAATTCCGCCGCCAGCAGTGCAATCAATACG > 1:25801879/1‑68 TGATTGCACGGCTGGCTGTCACGCAAAATTACCCCAGTAATTCCGCCGCCCGCCGTGCAATCAATACG > 1:29935287/1‑68 TGATTGCACGGCTGGCTGTCACGCAAAATTACCCCAGTAATTCCGCAGCCAGCCGTGCAATCAAGACG > 1:10163077/1‑68 TGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTACTTCCGCCGCCAGCCGTGCAATCAATACG > 1:13102933/1‑68 TGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACG > 1:1430312/1‑68 TGATTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACG > 1:21122635/1‑68 ATTGCACGGCTGGCTGTCACGCAAATTTGCAGCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTT > 1:25118193/1‑68 TTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTA > 1:11005423/1‑68 TTGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTA > 1:1297946/1‑68 TGCACGGCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCCGCCAGCCGTGCAATGAATACGTTAG > 1:26246492/1‑68 GCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCA < 1:13517035/68‑1 GCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCA > 1:32127833/1‑68 GCTGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCA > 1:6266889/1‑68 TGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAG < 1:26305524/68‑1 TGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAG < 1:7305452/68‑1 TGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAG > 1:15457027/1‑68 TGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAG < 1:31137696/68‑1 TGGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAG > 1:2601224/1‑68 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:10661710/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:5296425/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:13128240/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:3438420/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:16569393/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:127745/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:18526415/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:26671863/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:751332/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:21726163/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:8724772/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGA < 1:24123684/68‑1 GGCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGGGCAATCAATACGTTAGACAGCAAGA < 1:21975019/68‑1 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGCCAGCAAGAC > 1:28465812/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:7170384/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:8124138/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:31093418/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:31281919/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:17885178/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:28431402/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:25342596/1‑68 GCTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGAC > 1:22716724/1‑68 CTGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACA > 1:17012441/1‑68 TGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACA < 1:31750984/67‑1 TGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACA < 1:31573377/67‑1 TGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACA < 1:7442948/67‑1 TGTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACA < 1:26650203/67‑1 GTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG > 1:22901281/1‑68 GTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG > 1:14569762/1‑68 GTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG > 1:29351908/1‑68 GTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG < 1:21521237/68‑1 CATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/403472‑403544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggctgTCACGCAAAATTACACCAGTAATTCCGCAGCCAGCCGTGCAATCAATACGTTAGACAGCAAGACAGG < CP009273/403571‑403505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |