| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1240767 = | 303 (0.790) | 17 (0.050) | 10/96 | NT | 6.3% | coding (152/441 nt) | ycgY | uncharacterized protein |
| ? | CP009273 | = 1302830 | 250 (0.760) | coding (73/1461 nt) | clsA | cardiolipin synthase 1 | |||||
Only 100 of 102 total aligned reads displayed.
AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240840‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT < CP009273/1302830‑1302766 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:21113831/68‑1AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:31726706/68‑1AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC > 1:19320425/1‑68AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC < 1:22684915/68‑1 ATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCG > 1:4165142/1‑68 ATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCG > 1:17990697/1‑68 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:31120811/68‑1 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:30927595/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:31256606/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:31929811/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:27639365/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:17943121/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:6683144/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:11574070/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:10500720/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:1730940/1‑66 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGGGTA > 1:12934317/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT < 1:7983377/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:19287913/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:20402031/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:7197207/1‑65 TCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC > 1:23630434/1‑68 CCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC > 1:9836747/1‑67 CCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC > 1:23224431/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:14452691/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:24244672/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:13115130/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:1768494/1‑67 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATT < 1:11819093/67‑1 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATT < 1:1916903/67‑1 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:12180620/1‑66 ATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACG > 1:21170333/1‑67 TAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGC < 1:24310971/68‑1 TAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGC < 1:6114796/68‑1 TAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGC < 1:6078596/68‑1 AAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCT < 1:23465542/68‑1 AAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCT < 1:11682304/68‑1 AAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCC > 1:18190802/1‑67 AGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGC < 1:18960960/68‑1 TCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGG < 1:31123738/68‑1 TCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGT < 1:29757593/68‑1 TCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:11301828/68‑1 GCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:22543374/68‑1 GCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGG < 1:2162505/51‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:16564395/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:6937382/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24435803/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24530189/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24820493/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:2520996/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:25266906/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:6782820/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:1170372/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:20311896/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:30747094/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:16549363/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:4981973/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:14188457/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:31747182/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:14224983/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24222299/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:24157881/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:16979301/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:9243480/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:18857346/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:10505267/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:32105756/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:31544818/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:15278424/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:15315900/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:8978914/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:2984825/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:27022157/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:16968642/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTAT < 1:7765462/66‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTAT < 1:31860849/66‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:764317/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:30932151/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:2850322/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:19959290/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGC > 1:22229997/1‑51 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGGTCCCTCCGCGATGGCCTGGCTGTTGATTAT < 1:18398139/66‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACA < 1:19088201/68‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTAC < 1:20082128/67‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTAC < 1:16571499/67‑1 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTAC < 1:16936258/67‑1 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT < 1:13299909/68‑1 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:24428239/1‑68 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT < 1:10596036/68‑1 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTGTTTACAT > 1:21982511/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:14966196/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:13706072/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:8012798/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:9024094/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGATGATTATTTACAT > 1:16517310/1‑67 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:2667563/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:23413907/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:10380211/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:19914730/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:10488213/1‑66 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240840‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT < CP009273/1302830‑1302766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |