| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1240767 = | 303 (0.790) | 17 (0.050) | 10/96 | NT | 6.3% | coding (152/441 nt) | ycgY | uncharacterized protein |
| ? | CP009273 | = 1302830 | 250 (0.760) | coding (73/1461 nt) | clsA | cardiolipin synthase 1 | |||||
Only 100 of 369 total aligned reads displayed.
AGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTT > CP009273/1302763‑1302897 | aTGTAAATAATCATCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAag > 1:16517310‑M2/1‑65 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAag > 1:9024094‑M2/1‑65 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAa > 1:10380211‑M2/1‑65 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAa > 1:23413907‑M2/1‑65 (MQ=255) tGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagtt < 1:19088201‑M2/68‑5 (MQ=255) gTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagtt < 1:16936258‑M2/67‑5 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:6782820‑M2/1‑61 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:16564395‑M2/1‑61 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:14224983‑M2/1‑61 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:24435803‑M2/1‑61 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:18857346‑M2/1‑61 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg > 1:1170372‑M2/1‑61 (MQ=255) aataatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:22340768‑M2/67‑8 (MQ=255) aataatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:10505267‑M2/67‑8 (MQ=255) ataatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:31860849‑M2/66‑8 (MQ=255) taatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:764317‑M2/65‑8 (MQ=255) taatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:2850322‑M2/65‑8 (MQ=255) taatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacg < 1:30932151‑M2/65‑8 (MQ=255) aatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCt > 1:24485307/1‑67 (MQ=255) aatCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTg < 1:21572844/68‑1 (MQ=255) atCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGc > 1:28875472/1‑68 (MQ=255) atCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGc < 1:4916044/68‑1 (MQ=255) tCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCATGCa > 1:14566562/1‑68 (MQ=255) aCAGCCAGGGCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg > 1:22211555/1‑68 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacgcgaagagga < 1:29757593‑M2/68‑17 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg > 1:16117315/1‑68 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg < 1:31229407/68‑1 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg > 1:24215143/1‑68 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg > 1:8709164/1‑68 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATg > 1:10070775/1‑68 (MQ=255) gCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGc > 1:27974198/1‑68 (MQ=255) cAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAg < 1:27306512/65‑1 (MQ=255) ccATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAAcc < 1:16821002/66‑1 (MQ=255) ccATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAAcc < 1:11512998/66‑1 (MQ=255) ccATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCa < 1:12117519/67‑1 (MQ=255) ccATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAg > 1:5332418/1‑68 (MQ=255) ccATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAg > 1:15131023/1‑68 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACGAGt < 1:5942320/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:9432047/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:21919221/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt > 1:23853730/1‑68 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:20945275/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt > 1:1406535/1‑68 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt > 1:1297726/1‑68 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:12260122/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:18630405/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt < 1:195804/68‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGt > 1:20482479/1‑68 (MQ=255) cgcgGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATc < 1:26658353/68‑1 (MQ=255) ggAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacgcgaagaggaatggtctgaattctt > 1:18190802‑M2/1‑36 (MQ=255) aGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAagttacgcgaagaggaatggtctgaattcttttt < 1:23465542‑M2/68‑35 (MQ=255) aaCTGCGCGTCGTTTCATTAGTATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATg < 1:5542536/67‑1 (MQ=255) aaCTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATg > 1:18426442/1‑67 (MQ=255) aaCTGCGCGTCGTTTCATTAGAAAGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATg < 1:6698468/67‑1 (MQ=255) aCTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATgg > 1:3266457/1‑67 (MQ=255) aCTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATgg > 1:30847461/1‑67 (MQ=255) gcgTCGTTTCATTAGAATGCGTAAagttacgcgaagaggaatggtctgaattctttttttggttgcta < 1:24310971‑M2/68‑45 (MQ=255) gcgTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGccaacc > 1:25366530/1‑68 (MQ=255) gtcgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGccaacca < 1:20218/67‑1 (MQ=255) gtcgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGccaacca < 1:26741867/67‑1 (MQ=255) cgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCcaaccaac < 1:15453498/67‑1 (MQ=255) cgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCcaaccaac < 1:724997/67‑1 (MQ=255) cgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCcaaccaac < 1:26456069/67‑1 (MQ=255) cgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCcaaccaac < 1:232985/67‑1 (MQ=255) cgtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACt < 1:12589520/68‑1 (MQ=255) gtTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTc < 1:31046566/68‑1 (MQ=255) ttCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCa < 1:9224804/67‑1 (MQ=255) ttCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCa < 1:14422218/67‑1 (MQ=255) ttCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCa < 1:21375831/67‑1 (MQ=255) aTTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCa > 1:18038970/1‑67 (MQ=255) aTTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCa > 1:25061005/1‑67 (MQ=255) ttAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAAc < 1:19618282/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:13180323/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:7095687/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:8238318/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:8523015/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:11900547/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:15740936/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:24726226/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:28988838/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:25778731/68‑1 (MQ=255) tAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACg < 1:31554135/68‑1 (MQ=255) aGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGt < 1:20004534/68‑1 (MQ=255) aGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGt > 1:13543501/1‑68 (MQ=255) aGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGt > 1:29356735/1‑68 (MQ=255) aGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGt > 1:6321009/1‑68 (MQ=255) aaTGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACAAACGtat > 1:9623955/1‑68 (MQ=255) ttGCGTAAAGTTACGCGTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGta < 1:30018877/65‑1 (MQ=255) aTGCGTAAagttacgcgaagaggaatggtctgaattctttttttggttgctaaattctctggagtgt > 1:1768494‑M2/1‑8 (MQ=255) aTGCGTAAAGTTACGCCTGCAATGAGCAACCTGTATCCCAGAATGGCCAACCAACTCATCAACGta < 1:7918069/66‑1 (MQ=255) aTGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGta < 1:12477496/66‑1 (MQ=255) aTGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGta < 1:26188615/66‑1 (MQ=255) aTGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGta < 1:5028287/66‑1 (MQ=255) aTGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGta < 1:3894419/66‑1 (MQ=255) gTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACg < 1:30381977/68‑1 (MQ=255) tAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACgg > 1:17322523/1‑68 (MQ=255) tAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACgg > 1:10881980/1‑68 (MQ=255) aaaGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACgg < 1:2277710/67‑1 (MQ=255) aaGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGtt < 1:26907187/68‑1 (MQ=255) aaGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGtt < 1:1587076/68‑1 (MQ=255) | AGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGGCCAACCAACTCACCAACGTATAAACGGTT > CP009273/1302763‑1302897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |