| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 343 (0.890) | 18 (0.050) | 7/96 | NT | 6.3% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 243 (0.740) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1280731‑1280805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < CP009273/1280852‑1280786 TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGT > 1:2776485/1‑68TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGT > 1:5104449/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:16378253/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:17169103/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:1150304/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG > 1:26447949/1‑68 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:18424235/68‑1 CCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTG < 1:18708935/68‑1 CTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGG < 1:20563820/68‑1 CTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGG < 1:22586988/68‑1 TGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGG > 1:19649300/1‑67 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC < 1:19138078/68‑1 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:1939757/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:886940/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:17076465/1‑68 GCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGC > 1:9099093/1‑68 CGATTTAACGACGACGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGGGGCCGCG < 1:9217633/68‑1 gagTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:3510716/64‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:20775471/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:16552906/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:1509339/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:8279122/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:13692293/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG > 1:18116201/1‑67 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:6508911/67‑1 GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:23995936/67‑1 TCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACAT > 1:11598131/1‑68 CGCAGTACAGCGAACTGTTCGACCGGGGGCGCGGGCGCGGGATTCGGCGTGGACATGTTGAAACAGg > 1:8636120/1‑66 GCGAACTGTTCGACCGTGGCCGCGGTCGCGGGGTTCGCCGTGCACCTGTTGAAACAGCAACAGTGACG > 1:29000880/1‑68 GCGAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGGACATGTTCAAACAGCAACAGTGACG > 1:2390740/1‑68 GCGAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACCTGTTCAAACAGCAACAGTGACG > 1:31385896/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGCTTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:7685410/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCTGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:24828429/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCCCATGTTCAAACAGCAACAGTGACGTG > 1:19017953/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:17812482/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:16900999/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:1983163/1‑68 GAACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTG > 1:31882779/1‑68 GAACTGTTCGACCGTGGCCGCGGGCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGGCGTG > 1:5792543/1‑68 GAACTGTTCGACCGTGGCCCCGGTCGCGGGATTCGCCGTGCACATGTTCTAACAGCAACAGTGACGTG > 1:24384477/1‑68 ACTGTTCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGC > 1:15409553/1‑68 ACTGTTAGACCGTGGCCGCGGTCGCGGGGTTCGCCGTGCACATGTTCAAAAAGCAACAGTGCCGTGGC > 1:11100635/1‑68 TCGACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGG > 1:18666346/1‑67 CGACCGGGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCC > 1:13395022/1‑68 ACCGTGGCCGCGGTCGCGGGTTTCGCCGTGCACATGTTCAACCAGCAACAGTTACGTGGCGCGGCCAC > 1:27616008/1‑68 ACCGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCAC > 1:8146903/1‑68 CGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGG > 1:26603075/1‑68 CGTGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGG > 1:7167297/1‑68 ccGGCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGGGGCGCGGCCACGGT < 1:14230102/66‑1 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:16400415/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:1603548/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:1858235/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:112228/1‑68 GCCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:1836167/1‑68 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:127989/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:25849313/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:12392408/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:6495828/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:2739720/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:8986614/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:28030259/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:13540113/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:28256585/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:543682/67‑1 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA > 1:21192905/1‑67 CCGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGA < 1:22387960/67‑1 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAACCAGCAACAGTGACGTGGCGCGGCCACGGTCGAA > 1:1686702/1‑67 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:53247/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC < 1:10716961/68‑1 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:23285243/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:29288843/1‑68 CGCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAAC > 1:19355679/1‑68 GCGGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACA < 1:8473949/68‑1 GGTCGCGGGATTCGCGGTGCACATGTTCAAACAGCAACAGTGAGGTGGCGCGGCCACGGTCGAACAGT < 1:25989567/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:30888226/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:11138263/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:19431382/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:11313345/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:24850770/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:18037932/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:2675204/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:6302319/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:5872439/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:28234004/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:16807019/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT > 1:29406380/1‑68 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:3683671/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:15033854/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:3107806/68‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAG < 1:3069923/67‑1 GGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAG < 1:20865722/67‑1 GGTCGCGGGATTCGCCGTGCAAATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < 1:2510710/68‑1 TCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1280731‑1280805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgGTCGCGGGATTCGCCGTGCACATGTTCAAACAGCAACAGTGACGTGGCGCGGCCACGGTCGAACAGT < CP009273/1280852‑1280786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |