| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 343 (0.890) | 18 (0.050) | 7/96 | NT | 6.3% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 243 (0.740) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
Only 100 of 552 total aligned reads displayed.
CGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280738‑1280872 | gagttaacGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:3510716‑M1/64‑1 (MQ=255) gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:1509339‑M1/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:2819268/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:24868141/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:21643056/67‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:10485002/68‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:9597276/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:11859273/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:25303116/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:42658/68‑1 (MQ=255) actacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCTCGCCACGTc < 1:17645989/65‑1 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:3259989/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:1079601/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:28749302/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:15437808/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:460775/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGCCCGCGCCCCGTc > 1:22672578/1‑66 (MQ=255) cgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACt < 1:7002467/67‑1 (MQ=255) gaTGGATCCGCTCGATGCCCTGGCGCAGTACAGCGTACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:14909432/68‑1 (MQ=255) gaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:31292189/68‑1 (MQ=255) gaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt > 1:20260901/1‑68 (MQ=255) aTGGCTCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGtt > 1:9174323/1‑68 (MQ=255) gATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGtt > 1:16914691/1‑65 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTg < 1:16049332/67‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:27534011/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:12040504/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:16570665/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:6482590/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:26200834/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt > 1:2323354/1‑68 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:8808156/68‑1 (MQ=255) cGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGttt < 1:26069677/68‑1 (MQ=255) cTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:7998936/1‑68 (MQ=255) cTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:30958404/1‑68 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:21155464/1‑67 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa < 1:3970241/67‑1 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:1909584/1‑67 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:28340764/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:2669366/68‑1 (MQ=255) tGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtg < 1:5926288/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt < 1:2975039/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt < 1:7318982/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt < 1:25546477/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt < 1:14125247/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt < 1:25145243/68‑1 (MQ=255) ccAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGc < 1:11655538/68‑1 (MQ=255) ggCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg > 1:4923326/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACgg < 1:14684115/67‑1 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACgg < 1:1431576/67‑1 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:19616722/1‑68 (MQ=255) gccagcaggtccaccatagccTGGCCGCGCCACGTCACTGTTGCGGTTTGAACATGTGCACGGCGaa < 1:10013882‑M1/46‑1 (MQ=255) tACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAAt > 1:23734920/1‑67 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc > 1:8586545/1‑67 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGgtcgcggggttcgccgtgcacctgttgaaacagcaacagtgacg > 1:29000880‑M1/1‑24 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:19314515/1‑68 (MQ=255) caggtccaccatagccTGGCCGCGCCACGTCACTGTTGGTGTTTGAACATGTGCACGGCGAATCCcgc < 1:18224384‑M1/52‑1 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtg > 1:1983163‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtg > 1:31882779‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGggcgcgggattcgccgtgcacatgttcaaacagcaacagtggcgtg > 1:5792543‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:1837571/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:31573958/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:30109502/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:29421776/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:2046114/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:10963522/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:26970430/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:1582750/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:6775832/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:1140881/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:24365786/1‑67 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:19431382‑M2/68‑2 (MQ=255) gTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcg > 1:29288843‑M2/1‑64 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggc > 1:1858235‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg < 1:12392408‑M2/67‑6 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:13540113‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:127989‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg < 1:2739720‑M2/67‑6 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:24032805/1‑68 (MQ=255) ccGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAgg < 1:5278067/68‑1 (MQ=255) ccGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAgg < 1:22095436/68‑1 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:3063477/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:1522023/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCCAATCCCGCGACCGCGGCCAGGc > 1:22400971/1‑68 (MQ=255) gTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggccacggt > 1:8146903‑M2/1‑56 (MQ=255) ggCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggccccggtcg > 1:13395022‑M2/1‑54 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:11267255‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:21455466‑M1/1‑68 (MQ=255) gcggcgcCACGTCACTGTTGGTGTTTGAACATGCGCCCGGCGAATCCCGCGACCGCGGCCAGGCGAt < 1:22933671/64‑1 (MQ=37) gCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga > 1:16400415‑M1/1‑6 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga < 1:543682‑M1/67‑63 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga < 1:25849313‑M1/67‑63 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga > 1:28030259‑M1/1‑5 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:18780255‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:24975968‑M1/1‑67 (MQ=255) gcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaaca < 1:8473949‑M1/68‑66 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:11138263‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:16807019‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:18037932‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacag < 1:20865722‑M1/67‑67 (MQ=255) GCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtggtgg > 1:7578703‑M1/1‑67 (MQ=255) | CGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280738‑1280872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |