| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 211 (0.550) | 21 (0.060) | 8/94 | NT | 11.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 153 (0.470) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
CCGGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 CCGGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTA > 1:14362287/1‑67 ggtTTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:19709322/65‑1 GGATTATCTGTTTGCTGATAT‑CGTCTGTCCTGGCGGTGACGGCAGCAACAGTATCAATATTTCTCCCG < 1:26214917/68‑1 GGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:7080541/68‑1 GGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:25416579/68‑1 GGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:27909717/68‑1 GGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:16682776/68‑1 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:22887728/1‑68 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:27906546/1‑68 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:31682336/1‑68 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:15940529/1‑68 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:5029844/67‑1 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:31854362/67‑1 ATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:17378176/67‑1 TTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:7230748/67‑1 TTATCTGTTTGATGATAT‑CGTAGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:12887689/68‑1 TATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:32008188/1‑68 TATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG < 1:25965716/68‑1 TATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG < 1:5958905/68‑1 ATCTGTTTGCTGTTAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:23099966/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:29402230/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:29442642/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:30110227/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:31217838/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:31909331/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:9605813/68‑1 ATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:22499452/68‑1 ATCTGTTTGCTGATAT‑CGGCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:31717431/68‑1 TCTGTTTGCTGATATCCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:6650275/68‑1 TTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:3319376/67‑1 TGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:17690388/68‑1 TGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:3098506/68‑1 TGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:26934103/68‑1 GCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGA < 1:15891720/68‑1 GCTGATAT‑CGTCGGTACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGA < 1:10548676/68‑1 tgcTAT‑CGGCGGTACTGGCCGCGACGGCAGCAACAGTATCAATAATTCTACCGCCAGTACCGACGAT < 1:7701381/64‑1 TAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATC < 1:19997714/67‑1 TAT‑CGTCGGACCTGGCGGTGCCGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATC < 1:17421065/67‑1 T‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGC < 1:19309063/68‑1 CGTCGGCACTGGCGGTGCCGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCA < 1:7720579/68‑1 tGTACTGGCGGTGACCGCAGCAACAGTATCAAAATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:4636910/67‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:10662659/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:10961416/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:24952029/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:11306777/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:5499909/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:24857566/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:7849161/68‑1 gtCGGTTACGGCAGCAACAGTAACAATATTTCTACCGCAAGTACCGACGATATCAGCAAACAGATAAT < 1:14512247/66‑1 GGCGGTGACGGCAGCAACAGTAGCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAAT < 1:17787477/68‑1 ATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATACGGGCGCGGGAACGGCGCT > 1:20875143/1‑67 ACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:25900895/1‑68 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGCCCCGCGCTGCTTTTTCCAGTA > 1:15371518/1‑67 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGGTTTCCAGTA > 1:8688211/1‑67 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGC > 1:14067388/1‑67 CCAGTACCGACGATATCAGCAAACAGCTAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:11963851/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:1501120/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:30854595/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:30163780/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:15999388/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:16500769/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:28637030/1‑68 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCG < 1:14223444/68‑1 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCG > 1:6320217/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:27655983/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:20578315/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:9284377/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:21259538/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGCTT > 1:27514798/1‑68 CCGGATTATCTGTTTGCTGATAT‑CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |