| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 211 (0.550) | 21 (0.060) | 8/94 | NT | 11.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 153 (0.470) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 281 total aligned reads displayed.
ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 | acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTa > 1:12034947/1‑67 (MQ=255)acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:16273903/68‑1 (MQ=255)acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:14724622/68‑1 (MQ=255)acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:19158572/68‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATTTTGATACTGTTGCTGCGGTCACCGCCAGTaca < 1:4636910‑M1/48‑2 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:10662659‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:10961416‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:24952029‑M1/48‑1 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:25879872/1‑67 (MQ=255) ttgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcga < 1:3319376‑M2/5‑1 (MQ=255) tgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcgacg < 1:3098506‑M2/7‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:4424605/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:6268552/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:17175259/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:7150611/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:16620171/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:23129624/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg < 1:17878170/65‑1 (MQ=255) gctgatatcgtcggtactggcggggacggcagcaacagtatcaatatttctaccgccagtACcgacg‑a < 1:10548676‑M2/8‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg‑a < 1:20860257/68‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:26480557/67‑1 (MQ=255) gatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ata < 1:19997714‑M1/55‑1 (MQ=255) gatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGGCACCGCCAGGTCCGACG‑ata < 1:17421065‑M1/55‑1 (MQ=255) gcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATc > 1:12632932/1‑68 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCa > 1:12234265/1‑68 (MQ=255) atcgtcggtACTGGCGGTAGAATTATTGATACTGTTGCTGCCGTCGCGGCCAGTACCGccg‑atagca < 1:7701381‑M1/58‑4 (MQ=255) tcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACG‑ATATCAGc < 1:19309063‑M2/15‑1 (MQ=255) tcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGc < 1:15891720‑M1/60‑1 (MQ=255) cgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCa < 1:17690388‑M1/61‑1 (MQ=255) cgtcggcactggcggtgccggcagcaacagtatcaatatttctaccgccagtACCGACG‑ATATCAGCa < 1:7720579‑M2/16‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGc < 1:15575689/67‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACG‑ATATCAGCAAACa < 1:24857566‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACG‑ATATCAGCAAACa < 1:11306777‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:13085714/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:25391732/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:26745189/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:29338571/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:29128787/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:2744456/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTAGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:21372953/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAg > 1:28264319/1‑68 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAg < 1:23732006/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAg > 1:26957811/1‑68 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGGATATCAGCAAACAGa < 1:6650275‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAt < 1:9605813‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAt < 1:31909331‑M1/68‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAAt > 1:22887728‑M1/1‑68 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAAt > 1:27906546‑M1/1‑68 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAAt > 1:31682336‑M1/1‑68 (MQ=255) cGGTAGAAATTTTGATTCTGTTGCTGCCGTCCCCGCCAGTACAGACG‑AAATCAGCAAACAGATAATcc > 1:4219473/1‑68 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAgataaacc < 1:19709322‑M1/68‑4 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGgc > 1:5363831/1‑67 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCggg > 1:6214476/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCggg > 1:26164962/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCggg > 1:24613299/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCggg > 1:3835085/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCggg > 1:28075273/1‑68 (MQ=255) atTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGa < 1:30317862/68‑1 (MQ=255) ttGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGa > 1:5520882/1‑67 (MQ=255) gATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACg > 1:1527547/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:8513729/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:14260251/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:15421921/1‑68 (MQ=255) tACTGTTGCTGCCGGCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:27652007/68‑1 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGACCGgc > 1:29498287/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:28667786/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:27149784/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:29745009/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:1432921/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:26868913/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:16766976/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:26618103/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:4830824/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:20511200/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:3962394/1‑67 (MQ=255) tgctgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:21036040/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:18539324/1‑68 (MQ=255) tgctgcCGTCACCGCCAGTACCGACG‑ATATCACCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:9833194/67‑1 (MQ=255) gctgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGt < 1:8346853/68‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAAt > 1:7597324/1‑42 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:10221337/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:31780977/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:8027515/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:13350417/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:187715/67‑1 (MQ=255) gcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:17538454/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:6878614/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:13893167/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:25539789/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:8962501/68‑1 (MQ=255) ccGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:26078962/67‑1 (MQ=255) ccgccagtACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGGTTTCCAGTa > 1:8688211‑M2/9‑67 (MQ=255) ccagtACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:15999388‑M2/6‑68 (MQ=255) ccagtACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:1501120‑M2/6‑68 (MQ=255) ccagtACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:30163780‑M2/6‑68 (MQ=255) ccagtACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:30854595‑M2/6‑68 (MQ=255) tACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:9284377‑M2/2‑68 (MQ=255) aCCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:11637185/67‑1 (MQ=255) aCCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:10884477/67‑1 (MQ=255) aCCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTACAGTAGCGCGGtt > 1:21861636/1‑67 (MQ=255) | ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |