| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 211 (0.550) | 21 (0.060) | 8/94 | NT | 11.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 153 (0.470) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 297 total aligned reads displayed.
ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAT > CP009273/1314696‑1314830 | aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:21259538‑M1/68‑68 (MQ=255)aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:27655983‑M1/68‑68 (MQ=255) tttACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCa < 1:20495485/67‑1 (MQ=255) tACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg > 1:1475765/1‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:30854595‑M1/64‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:30163780‑M1/64‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:1501120‑M1/64‑68 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:29739109/68‑1 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:18590243/68‑1 (MQ=255) cTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc < 1:4677871/68‑1 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg < 1:12518670/68‑1 (MQ=255) ggAGACGCTACGGTTGCCGTTTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg < 1:13605150/68‑1 (MQ=255) ggAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg < 1:734388/68‑1 (MQ=255) ggAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCAACAGGCCGCGGCGACAAACGCACTGGCgg > 1:26058573/1‑68 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACACGCCGCGGCGACAAACGCACTGGCGGt < 1:23782157/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:2410080/67‑1 (MQ=255) aCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTAGCGGTAGa > 1:19333584/1‑68 (MQ=255) tACGTTTGGCGTGTTTCGCCACTTTCAGCCCAGAGGCCGAGGCGACAAACGCACTGGCGGTAGAtata < 1:16708726/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:5381416/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:19219234/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:745800/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:21788332/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:5827765/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:19573633/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:2520613/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:27094786/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:3378326/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:29569926/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:310852/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:1009967/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:13276055/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:1369840/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:1584331/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:14880221/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCAGCGACAAACGCACTGGCGGTAGAAata < 1:23435199/68‑1 (MQ=255) tACGGGTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:16157243/68‑1 (MQ=255) cGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATAtt < 1:18996985/68‑1 (MQ=255) cGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATAtt < 1:8395872/68‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg < 1:16994466/68‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg > 1:9173365/1‑68 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg < 1:24866546/68‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg < 1:14521686/68‑1 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:29064660/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:26514237/1‑68 (MQ=255) gTTGCCGTGATTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:2145589/1‑68 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGTTAGAAATATTGATACt < 1:20268180/67‑1 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:25470988/1‑64 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACt < 1:6010404/67‑1 (MQ=255) cGTGTTTCGCCACTTACAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTg < 1:1532070/68‑1 (MQ=255) gtgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGt < 1:10018366/68‑1 (MQ=255) tgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:31975432/1‑68 (MQ=255) ttCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:8629097/1‑65 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGt < 1:14081534/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCAcc > 1:28281406/1‑67 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:3763617/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:11179026/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:28438792/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:28105740/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:15132364/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:16371905/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:22382601/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:15673021/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:13035255/68‑1 (MQ=255) attatctgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGCTACTGTTGCTGCCGTCACCGcc < 1:17787477‑M1/42‑1 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAg > 1:269147/1‑68 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAg > 1:12359813/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCa < 1:10610126/66‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:28592181/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:6863738/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:19756670/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:12618211/68‑1 (MQ=255) cacaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:18508751/1‑67 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTa > 1:12034947/1‑67 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:8808997/68‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:7849161‑M1/48‑1 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:23560485/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:2309195/1‑67 (MQ=255) gCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgac > 1:24525786/1‑68 (MQ=255) tgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGGCACCGCCAGTGCcgacg < 1:7720579‑M1/52‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:4424605/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:6268552/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:17175259/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:7150611/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg < 1:11606248/65‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg < 1:17878170/65‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg‑a < 1:20860257/68‑1 (MQ=255) gcggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑at < 1:26155990/68‑1 (MQ=255) gcggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑at < 1:15510794/68‑1 (MQ=255) gatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGGCACCGCCAGGTCCGACG‑ata < 1:17421065‑M1/55‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGc < 1:29143671/67‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:1430209/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:8187491/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:31702675/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:10928529/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:5134063/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACa < 1:2744456/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGGATATCAGCAAACAGa < 1:6650275‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAt < 1:9605813‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAt < 1:22499452‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAt < 1:29402230‑M1/68‑1 (MQ=255) | ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACG‑ATATCAGCAAACAGAT > CP009273/1314696‑1314830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |