| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2279605 = | 377 (0.980) | 15 (0.050) | 7/86 | NT | 5.9% | coding (1751/1761 nt) | yejM | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor |
| ? | CP009273 | 2279638 = | 193 (0.650) | intergenic (+23/‑52) | yejM/proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro | |||||
Only 100 of 197 total aligned reads displayed.
GGCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2279683‑2279605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcagttagcgaAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA > CP009273/2279638‑2279703 GGCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTA < 1:27490071/67‑1 GCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAA > 1:18463808/1‑67 GCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAA > 1:4930502/1‑67 GCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAA > 1:469061/1‑67 GCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAA > 1:9337235/1‑67 CTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAAT < 1:2536733/67‑1 TGCTAATACTACCGTTTTCCACACCGATTGCAAGGAAGATATTTCGCTAACTGATTTATAATTAATCA < 1:19025598/68‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:6593033/67‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:1931717/67‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:25945712/67‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:2890921/67‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:30544449/67‑1 TAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGT < 1:30690961/67‑1 AATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTA < 1:20518839/68‑1 ATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTA > 1:8570724/1‑67 TACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGC < 1:26412161/68‑1 TACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGC > 1:26106257/1‑68 TACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGC < 1:23404522/68‑1 TACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGC < 1:16481769/68‑1 TACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGC < 1:9784298/68‑1 ACTGCCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:25127450/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:21146730/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:20349613/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:4632557/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:24285409/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:10288807/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:14276948/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:13994458/1‑68 ACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCG > 1:16842878/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA < 1:31990932/68‑1 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:7002877/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:7296505/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:30371286/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:7957150/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:345825/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:13573009/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:28157618/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:27828324/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:6113023/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:17527935/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:26759921/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:27034397/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:14745258/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:8336520/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:18711170/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:17088416/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:19902839/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:22929705/1‑68 CTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA > 1:22403811/1‑68 CCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAAT < 1:30129823/68‑1 CACACCGATAGCAAGTAAGATATTTCGCAAACTGATTTAAAATAAATCAGTTAGCGAAATATCTTACT < 1:19990528/68‑1 TTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCG < 1:15277108/68‑1 GCAAGTAAGATCTTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGT < 1:23167790/68‑1 GCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGT < 1:3882893/68‑1 GCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGT < 1:12119738/68‑1 AAGATATTTCGCTAACTGATTTAAAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGG < 1:15905568/66‑1 taaTTCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACG < 1:6508879/65‑1 TCGCAAACTCATTAAAAATTAATCACTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAG < 1:18555600/68‑1 GCTAACTCCTTTATAATTAATCAGTAAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTA < 1:5317671/68‑1 AATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGG < 1:9179984/68‑1 AATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGG < 1:10865885/68‑1 AATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCG > 1:8641498/1‑67 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:30578965/1‑68 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:313083/1‑68 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:3778813/1‑68 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:8953553/1‑68 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:8282585/1‑68 ATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:51127/1‑68 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:11333417/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:27449578/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:31664232/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:5557806/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:16932339/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:24398639/1‑67 TCAGTTAGCGAAATATCTTACTTGCAATAGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGC > 1:15382465/1‑67 CAGTTAGCGAAATATCTTACTTGCAATCTGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:4175974/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:18055728/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:31722192/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:12228567/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:12407639/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:22137432/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:16093756/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:23725291/68‑1 CAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC < 1:25866867/68‑1 AGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACG > 1:14911242/1‑68 AGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACG > 1:23928041/1‑68 AGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACG > 1:25428828/1‑68 TAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTA < 1:10341021/67‑1 AGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGC < 1:7635842/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:31915880/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:30873418/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:28439301/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:25599881/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:25028795/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:16907838/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:16637721/68‑1 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA > 1:13286347/1‑68 GAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA < 1:11714929/68‑1 AAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCGACGAGTCGGCACGTAGCGCA > 1:2952524/1‑67 AAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA > 1:16349332/1‑67 GGCTGCTAATACTACCGTTTTCCACACCGATTGCAAGTAAGATATTTCGCTAACTGATTTATAATTAATCAGTTAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2279683‑2279605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcagttagcgaAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCA > CP009273/2279638‑2279703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |