| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2495412 = | 241 (0.630) | 8 (0.030) | 4/92 | NT | 5.0% | coding (804/858 nt) | ypdC | putative DNA‑binding protein |
| ? | CP009273 | 2495438 = | 105 (0.330) | coding (830/858 nt) | ypdC | putative DNA‑binding protein | |||||
ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2495486‑2495412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacgccggGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGAT > CP009273/2495438‑2495504 ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTG > 1:30620807/1‑68ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTG > 1:28074064/1‑68ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTG > 1:19468447/1‑68ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTG > 1:14794387/1‑68ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACT > 1:9776760/1‑67 ATTAAGCTTCTGACGTTAGCGCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGc < 1:13151688/64‑2 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCC > 1:31609871/1‑68 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCC < 1:12296702/68‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCC > 1:19540038/1‑68 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCC > 1:17813811/1‑68 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACG < 1:10768144/66‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACG < 1:27249768/66‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACG < 1:27104376/66‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACG < 1:26503731/66‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACG < 1:25547511/66‑1 ATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGA < 1:15702153/64‑1 TTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGGCAGACCAAACTGACGCCG < 1:5312358/68‑1 acCCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGG < 1:20192415/66‑1 AACCTTCTGCCGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGG < 1:29846143/68‑1 AACCTTCTGACGTTAGCCCTGAAACCGGGCGCTGTACTCTCCCGGCGGCAGACCAAACTGACGCCGGG < 1:7219687/68‑1 AACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGCCGCCGGG < 1:21155151/68‑1 AACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGG < 1:5588971/68‑1 AACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGG < 1:10859377/68‑1 AACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTA‑‑CTCCCGGCGTCAGACCAAACTGACGCCGGGAG < 1:26037224/68‑1 CCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAG < 1:31882346/68‑1 CCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAG < 1:27358776/68‑1 CCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAG < 1:21104474/68‑1 CCTACTGACGGTAGCCCTGAAAACGGGCGCTGTCCTCTCCCGGCGTCAGACCAAACTGACGCCGGGAG < 1:8362214/68‑1 CTTCTGACGTTAGCCCTGAAACCGGGCGCTGTACTCTCCCGGCGGCAGACCAAACTGACGCCGGGAGA < 1:9421002/68‑1 CTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGA < 1:4251057/68‑1 CTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGA < 1:11311943/68‑1 CTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGA < 1:28991121/68‑1 TTCTGACGTTCGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGAG < 1:15229791/68‑1 TCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGAGT < 1:5897435/68‑1 TCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGAGT < 1:29755717/68‑1 TCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGAGT < 1:14223613/68‑1 aAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAACCTGACGCCGGGAGAGTACAGCGCC < 1:22367561/67‑1 CGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAA < 1:28846835/67‑1 CGCTGCACGCACCCGCCGCCAGACCAAACTGCCGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAAC < 1:23316294/68‑1 CGCTGAACTCTCCCGGCGGCAGACCAAACTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAA < 1:28934874/67‑1 CGCGGTACTCCCCCGGCGGCAGACCAAACTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAA < 1:21606433/67‑1 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:8208798/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:17626183/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:14353283/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:31645080/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:4281776/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:17430142/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCA > 1:11461669/1‑67 CTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTAAATTCTGTTTCCAGCA > 1:12771570/1‑67 GACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCG < 1:21867037/68‑1 CGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTC < 1:2319030/68‑1 CGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTC > 1:3957171/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:2185/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:13013504/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:4130977/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:9442821/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:9229720/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:11416590/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:2025306/1‑68 GCCGGGAGAGTACAGCGCCCGTTTTCAGGGCGAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCA > 1:26503767/1‑68 CCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAG > 1:23175481/1‑68 CGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGG < 1:1714824/68‑1 CGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAG < 1:3495143/67‑1 CGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAG < 1:24038592/67‑1 CGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAG < 1:1930030/67‑1 CGGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAG < 1:17278241/67‑1 GGGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGA < 1:14657875/68‑1 GGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGAT > 1:8022771/1‑68 GGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGAT > 1:19041625/1‑68 GGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGAT > 1:10708875/1‑68 ACAGAATTAACCTTCTGACGTTAGCCCTGAAAACGGGCGCTGTACTCTCCCGGCGTCAGACCAAACTGACGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2495486‑2495412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacgccggGAGAGTACAGCGCCCGTTTTCAGGGCTAACGTCAGAAGGTTAATTCTGTTTCCAGCAGCGTCAGGAT > CP009273/2495438‑2495504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |