BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2640581	260 (0.680)	13 (0.040)	7/98	NT	5.2%	coding (104/2313 nt)	pbpC	penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain
*	?	CP009273	= 2640609	251 (0.750)	13 (0.040)	7/98	NT	5.2%	coding (76/2313 nt)	pbpC	penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain

Only 100 of 104 total aligned reads displayed.

GCATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2640509‑2640581

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagcgTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGC  <  CP009273/2640609‑2640543

GCATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCAT                                                                           >  1:27716198/1‑67

GCATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCAT                                                                           >  1:27458692/1‑67

GCATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCAT                                                                           >  1:27496763/1‑67

 CATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGC                                                                         >  1:18547692/1‑68

 CATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGC                                                                         >  1:17227825/1‑68

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:3642677/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:19747904/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        >  1:15581746/1‑68

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:19902424/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:23227692/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:13638989/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:13219310/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:12120747/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        >  1:5410617/1‑68

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:8777727/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:2875563/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:8886488/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        <  1:29306250/68‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        >  1:29387328/1‑68

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGC                                                                         <  1:23847456/67‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATG                                                                          <  1:30636400/66‑1

  ATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTCCATGCA                                                                        <  1:23225373/68‑1

   TCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCA                                                                        >  1:9386621/1‑67

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCCCTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:14636516/68‑1

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:19311015/68‑1

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:1979199/68‑1

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:22107338/68‑1

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:24745558/68‑1

    CGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGC                                                                      <  1:7275528/68‑1

     GGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG                                                                     >  1:17918370/1‑68

     GGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG                                                                     <  1:24324592/68‑1

     GGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG                                                                     <  1:19240245/68‑1

     GGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG                                                                     <  1:4402413/68‑1

     GGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG                                                                     >  1:26461124/1‑68

               CAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCTTGCAGCGTGGGGAGCA                                                            <  1:3118708/67‑1

               CAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCA                                                            <  1:17922588/67‑1

               CAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCA                                                            <  1:27292430/67‑1

                  AGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCTTGCAGCGTTGGCAGCAGATA                                                        >  1:14495634/1‑68

                   GCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGA                                                          <  1:25018609/65‑1

                   GCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGA                                                          <  1:28477597/65‑1

                   GCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGA                                                          <  1:30028788/65‑1

                   GCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGA                                                          <  1:1089771/65‑1

                          ACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGATAAACTCTGG                                                <  1:20131374/68‑1

                          ACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGATAAACTCTGG                                                <  1:12034818/68‑1

                           CCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCTTGCAGCGTGGGGAGCAGATAAACTCTGGC                                               <  1:10355375/68‑1

                             ATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGATAAACTCTGGCCT                                             <  1:7924867/68‑1

                                    GCCACGACCACTCGTGCGGGATTGACTTCATGCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGC                                      <  1:28521398/68‑1

                                                                   GCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGT       >  1:22687498/1‑68

                                                                   GCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGT       <  1:12546176/68‑1

                                                                   GCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGT       >  1:4759636/1‑68

                                                                   GCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGT       >  1:11628572/1‑68

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:5862008/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:11367552/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:29053998/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:30489755/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:29869192/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:25226712/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:11793821/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:1948652/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:26855663/1‑67

                                                                     AGCGTGGGGAGCAGATAAACTCTGGCCACTACAGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTG      >  1:20045798/1‑67

                                                                       CGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    >  1:14346577/1‑67

                                                                        GTGTGGAGCAGATAAACTCTGGCCTCTACCGCTGGATGAAGTCAATCCCGCACGAGTGGTCGTGG     <  1:4282787/65‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGC  <  1:24043757/68‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGC  >  1:17582876/1‑68

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:8704858/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:8569177/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:311153/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:31153246/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:7207862/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:6193052/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:3631064/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:9111852/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:5759500/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:24228260/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:18762303/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:1075336/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:10936897/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:11199805/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:11449621/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:12488215/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:12927848/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:14394427/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:1519565/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:15201516/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:15331537/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:16128379/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:29059423/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:20665855/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:23593266/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:23606380/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:23943629/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:24694267/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:24958684/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:25551451/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:27768505/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:28388930/66‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGG     <  1:8239563/65‑1

                                                                        GTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGGCGTGGC    <  1:20460189/66‑1

                                                                        GTGGGGAGCAGATAAACACTGGCCTCTACCTCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGC    <  1:3564996/66‑1

GCATCGGCGAAGCGCCAGAGCGGCGTACCATCCTGCGCCACGACCACTCGTGCGGGATTGACTTCATGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2640509‑2640581

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagcgTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGC  <  CP009273/2640609‑2640543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.