| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3615265 | NA (NA) | 5 (0.010) | 3/100 | NT | 100% | coding (2714/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | = 3615283 | 0 (0.000) | coding (2732/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
TGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCggcagg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3615205‑3615265‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAACG < CP009273/3615283‑3615212 TGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGC < 1:18646500/68‑1TGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGC < 1:18609785/68‑1 TCACACCACCGCAGCGAATCTCGATATCCGCATCCCGTATGCCACAGACCCGGCAGGCGGTTACCTG < 1:21669377/67‑1 GAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGCGGTTACCTGCCGGGTCTGTGGC < 1:10917064/65‑1 GAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGCGGTTACCTGCCGGGTCTGTGGC < 1:22498979/65‑1 GAATCTGGATATCCGCAACCCGTATGCCACAGACCCGGCAGGCGGTTACCTGCCGGGTCTGTGGC < 1:7223219/65‑1 CCACAGACCCGGCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCT > 1:27721933/1‑67 gcgGGCGGTTACCTGCCGGGGCTGTGGCATACGGGATGCGGTTCTCCAGATTCGCTGCGGTGGTGTGA > 1:23131939/4‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:17108868/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:16881721/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:478084/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:5203635/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:22533513/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:22855891/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:27469969/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:29306574/1‑68 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGT < 1:19537442/61‑1 GCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATCCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:12705287/1‑68 CAGGCTTTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA < 1:30956167/67‑1 CAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA < 1:10972937/67‑1 CAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA < 1:27640046/67‑1 CAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA > 1:16454498/1‑67 CAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGA < 1:11239317/67‑1 GGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAAC > 1:24100113/1‑67 GGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAAC > 1:16553627/1‑67 GGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAAC > 1:8272414/1‑67 GCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAACG > 1:6878842/1‑67 TGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCggcagg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3615205‑3615265‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGGCGGTTACCTGCCGGGTCTGTGGCATACGGGATGCGGATATCCAGATTCGCTGCGGTGGTGTGAACG < CP009273/3615283‑3615212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |