| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3622650 = | 540 (1.400) | 22 (0.070) | 8/96 | NT | 5.4% | coding (249/2736 nt) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| ? | CP009273 | 3622682 = | 304 (0.920) | coding (217/2736 nt) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein | |||||
TCCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3622724‑3622650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACT > CP009273/3622682‑3622747 TCCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCA > 1:27559430/1‑68 CCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCAT < 1:14400544/68‑1 CCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCAT < 1:29590235/68‑1 CCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCA > 1:1448294/1‑67 CGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC < 1:10969961/68‑1 CGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC < 1:24939800/68‑1 CGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCGGGGCGGCGATATGCGCGACCCGAAGCATC < 1:8658262/68‑1 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:10482634/1‑67 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:22325928/1‑67 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:11949765/1‑67 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:23591109/1‑67 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:26751851/1‑67 GGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATC > 1:14513619/1‑67 GTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCG > 1:2054225/1‑67 TGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCC > 1:14595931/1‑68 TGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCC > 1:4478335/1‑68 TGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCC > 1:8967112/1‑68 GCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCC < 1:27008663/67‑1 CCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC > 1:16451711/1‑68 CCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC > 1:8638971/1‑68 CCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC > 1:10651873/1‑68 CCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC > 1:22003666/1‑68 CCGCGTCATTGAACAGGGCTTCGTGAAGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:16807022/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:3730750/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:24728283/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:25944055/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:6896927/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:13530621/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:13728259/67‑1 CCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:15848435/67‑1 CCGCGGCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC < 1:1337650/67‑1 ATTGACCAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACC < 1:2300937/68‑1 ATTGAACCGCGCAATGTGATGGTGCTGGGCGGCGATCTGCGCGACCCGAAGCATCGCCGCCCAGCACC < 1:5515727/68‑1 ATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACC < 1:8072041/68‑1 ATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGAAATGCGCGACCCGAAGCATCGCCGCCCAGCACC < 1:27633975/68‑1 ATTGAACAGGCCAATGTGATGGGGCTGGGCGGCGAAATGCGCGACCCGAAGCATCGCCGCCCAGCACC < 1:25697446/68‑1 TGAACCGGGCAATGTGAGGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCAT < 1:28839499/68‑1 cCAGGGCAATGTGATGGTGCTGGGCGGCTATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCAC < 1:4289275/67‑1 cCAGGGCAATGTGATGGGGCTGGGCGGCGAAATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCAC < 1:10031310/67‑1 aAATGTGATGGTGCTGGGCGGCTATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGC < 1:9503770/66‑1 CAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGC < 1:21691720/67‑1 CAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGC < 1:24960794/67‑1 TGTGATGGTGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTG < 1:11575900/68‑1 ggGATGGGGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:14166593/66‑1 GTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACTATCACATTGCCCTGT < 1:17496678/68‑1 GTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:2337092/68‑1 GTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCAGCGCCGCCCAGCACCATCACATTGCCCTGT < 1:19269941/68‑1 GTGATGGTGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:27895731/68‑1 GTGAGGGTGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:8166260/68‑1 GTGAGGGGGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:28109066/68‑1 GTGACGGTGCTGGGCGGCGAAATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGT < 1:26320973/68‑1 ATGGTGCGGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGTTC < 1:28373569/67‑1 TATGCGCGACCCGAAGCATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGA < 1:17442556/68‑1 ATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAA > 1:26539208/1‑66 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCT < 1:8318671/68‑1 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:23566599/1‑67 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:3982764/1‑67 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:30534660/1‑67 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:2916012/1‑67 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:16036792/1‑67 TCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGC > 1:17181210/1‑67 CGCCGCCCAGCACCATCACATTGCCCTGTTCAATGCCGCGGGCACCGGAAATCAACGACAACAAGCTC > 1:15193514/1‑68 CGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCTCCGGAAAGCAACGACATCTAGCTC > 1:26696670/1‑68 CGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTC > 1:20468660/1‑68 CGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTC > 1:22220555/1‑68 CGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGAC < 1:4126149/68‑1 GCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACT > 1:23474692/1‑68 CCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACT > 1:28183425/1‑67 TCCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3622724‑3622650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACT > CP009273/3622682‑3622747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |