New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3622650 =540 (1.400)22 (0.070) 8/96 NT 5.4% coding (249/2736 nt) rbbA ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein
?CP009273 3622682 = 304 (0.920)coding (217/2736 nt) rbbA ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein

Only 100 of 461 total aligned reads displayed.

CCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTC  >  CP009273/3622615‑3622749
                                                                   |                                                                   
  cTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCa                                                                   <  1:13041530/68‑1 (MQ=255)
   tGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCgccgccagc                                                                  <  1:26634879/68‑4 (MQ=255)
    gCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 <  1:29834005/68‑1 (MQ=255)
    gCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 <  1:12467662/68‑1 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGCTGCTTCGGGTCGCGCATATCGCCGCCAAGc                                                                 >  1:180436/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCCGc                                                                 >  1:25485056/1‑67 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGcc                                                                >  1:11004007/1‑66 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                >  1:17537505/1‑67 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:16822515/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:24917935/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                >  1:753210/1‑67 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:17027555/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAc                                                               <  1:8045796/68‑1 (MQ=255)
       gCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              >  1:6812623/1‑68 (MQ=255)
       attgaaccgcgcaatgtgatggtgctgggcggcgatctgcgcgacccgaagcatcgccgcCCAGCAcc                                                              <  1:5515727‑M2/8‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:14066818/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:27918929/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:30088179/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:15980561/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:18667000/67‑1 (MQ=255)
         aTCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCAt                                                            <  1:15406141/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:9070249/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:5128302/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:25834383/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:28458991/68‑1 (MQ=255)
              ggCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATGTCGCCGCCCAGCACCATCACAt                                                       >  1:23026680/1‑68 (MQ=255)
              ggCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAt                                                       >  1:19763885/1‑68 (MQ=255)
              ggCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAt                                                       >  1:20977595/1‑68 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:6568592/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:8172429/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:23827027/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:24238283/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:31101538/1‑67 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCGGCCCAGCACCATCACATTGc                                                    <  1:30546486/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTg                                                     >  1:15723464/1‑67 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:21430621/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:9808852/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:27707489/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:31491908/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:1821286/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:9657626/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:1065997/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:11587195/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:9502785/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:14230742/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:8691538/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:17909342/68‑1 (MQ=255)
                  caatgtgatggtgctgggcggcgatatgcgcgacccgaagcatcgccgcCCAGCACCATCACATTGc                                                    <  1:24960794‑M2/18‑1 (MQ=255)
                  caatgtgatggtgctgggcggcgatatgcgcgacccgaagcatcgccgcCCAGCACCATCACATTGc                                                    <  1:21691720‑M2/18‑1 (MQ=255)
                    gcgcGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    >  1:581985/1‑65 (MQ=255)
                    gcgcGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCt                                                 <  1:16318966/68‑1 (MQ=255)
                     cgcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    >  1:30855347/1‑64 (MQ=255)
                      gtgatggtgctggGCGGCGATGCTTCGGGTCGCGCATTTCGCCGCCCAGCCCCATCACATTGCCCtgg                                               <  1:10031310‑M1/55‑2 (MQ=255)
                      gtgagggggcggggcggcgatatgcgcgacccgaagcatcgccgcCCAGCACCATCACATTGCCCTGt                                               <  1:28109066‑M2/23‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCTCATTGCCCTGt                                               <  1:22823407/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:1312699/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:4075889/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:349237/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:28385744/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:28998097/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:2933608/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:11443731/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:6368599/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:13356841/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:4567914/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:5217843/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:23260611/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:851369/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:14726020/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:16119773/68‑1 (MQ=255)
                         atggtgctggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCCTCACATTGCCCGGTTCa                                            <  1:28839499‑M1/58‑1 (MQ=255)
                           ggtgctggGCGGCGATGCTTCGGGTCGCGCATTTCGCCGCCCAGCCCCATCACATTGGCCTGTTCAAt                                          <  1:25697446‑M1/60‑1 (MQ=255)
                               cGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGa                                        <  1:17266582/66‑1 (MQ=255)
                                gTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGAcgc                                     >  1:23459157/1‑68 (MQ=255)
                                gTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGAcgc                                     >  1:13893961/1‑68 (MQ=255)
                                   GCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCggg                                  >  1:22003666‑M1/1‑68 (MQ=255)
                                   GCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCgg                                   <  1:24728283‑M1/67‑1 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:23591109‑M1/1‑67 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:14513619‑M1/1‑67 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:11949765‑M1/1‑67 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:26751851‑M1/1‑67 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:10482634‑M1/1‑67 (MQ=255)
                                         ATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCgg                            <  1:14400544‑M1/68‑1 (MQ=255)
                                             ttCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGaaa                         >  1:27060093/1‑67 (MQ=255)
                                             ttCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGaaa                         >  1:19386674/1‑67 (MQ=255)
                                                  gTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACg                   >  1:2756140/1‑68 (MQ=255)
                                                  gTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACg                   >  1:19203278/1‑68 (MQ=255)
                                                     gcgcATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGaca                <  1:7658106/68‑1 (MQ=255)
                                                       gcATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGacaac              >  1:20062854/1‑68 (MQ=255)
                                                         atatCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            <  1:20867874/68‑1 (MQ=255)
                                                         atatCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            <  1:31848513/68‑1 (MQ=255)
                                                             cgccgcCCAGCACCATCACATTGCCCTGTTCAATGCCGCGGGCACCGGAAATCAACGACAACAAGCTc        >  1:15193514‑M2/7‑68 (MQ=255)
                                                             cgccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTc        >  1:20468660‑M2/7‑68 (MQ=255)
                                                                  cCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACt    >  1:28183425‑M2/2‑67 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACtt   >  1:26031541/1‑67 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACtt   >  1:8812045/1‑67 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACtt   >  1:4310657/1‑67 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTc  <  1:13625567/68‑1 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTc  <  1:26366645/68‑1 (MQ=255)
                                                                   ccAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTc  <  1:10144636/68‑1 (MQ=255)
                                                                   |                                                                   
CCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTC  >  CP009273/3622615‑3622749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.