| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3757369 = | 0 (0.000) | 5 (0.020) | 4/96 | NT | 100% | coding (1827/4134 nt) | rhsA | Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | CP009273 | 3757464 = | NA (NA) | coding (1922/4134 nt) | rhsA | Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
Only 100 of 103 total aligned reads displayed.
CTGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3757443‑3757369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgccgGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > CP009273/3757464‑3757529 CTGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT < 1:16546460/68‑1CTGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT < 1:27291331/68‑1 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCCCGCATCGTACTGTGTCCCGTTTCT > 1:11330219/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCCTCGTACTGTGTCCCGTTTCT > 1:815680/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:18688158/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:20670655/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:15921923/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:15773909/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:2074125/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:22129220/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:25803742/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:27585209/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:2760339/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:13096211/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:27869819/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:29118173/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:31136260/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:3187421/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:4538935/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGGTTCT > 1:25435279/1‑67 TGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCATTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:9691993/1‑67 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGC < 1:19584649/68‑1 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:1890177/1‑66 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:7583647/1‑66 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:325568/1‑66 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:2808687/1‑66 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:13856401/1‑66 GCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCT > 1:24599212/1‑66 GCGTTAGCCCGCCCTGNGNNGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT < 1:10178476/67‑1 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT > 1:18363117/1‑67 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT > 1:9665550/1‑67 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT < 1:8127359/67‑1 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT > 1:6796829/1‑67 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCT > 1:28779600/1‑67 GCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTGCTGCT > 1:4674576/1‑67 TAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCGG < 1:24333364/68‑1 CCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCGGACGGGTCA > 1:3615375/1‑68 ACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCGGACGGGTCATCCGCCTGA > 1:13234649/1‑67 ACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCGGACGGGTCATCCGCCTGA > 1:24013112/1‑67 CGCATCGTACTGTGTCCCGTTTCTGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCC > 1:22055861/1‑67 CCCGTTTCTGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTT > 1:2935638/1‑67 GTTTCTGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGA > 1:3127685/1‑68 gtTGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGT < 1:17693807/66‑1 CTGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCCGCCACCCCACCTTCCGTTACGATGT > 1:26247426/1‑67 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTAC < 1:3838792/68‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTA < 1:3894335/67‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTA < 1:1959905/67‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTA < 1:19590247/67‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTA < 1:8043440/67‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTA < 1:9332230/67‑1 TGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGT > 1:12922038/1‑66 GCTGCCGGACGGGTCATCCGCCTGCCCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:21771084/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCGGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:21662047/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCCCACCACCTTCCGTTACGAGGTACT > 1:23950675/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGCTGTACT > 1:30699440/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACg > 1:13962823/1‑67 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:7960581/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:23538724/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:4910511/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:4341898/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:23561045/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:23596827/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:5430435/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:6398751/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:29701181/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:29391709/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:12284990/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:18806426/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:15240297/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACT > 1:21359777/1‑68 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTAC > 1:29173342/1‑67 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTAC > 1:14026144/1‑67 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTAC > 1:3952137/1‑67 GCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTAC > 1:21919981/1‑67 TGCCGGAGGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTG < 1:14245770/68‑1 TGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTc > 1:19711846/1‑67 TGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTG > 1:10683346/1‑68 TGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTG > 1:22196946/1‑68 TGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTG > 1:10542592/1‑68 TGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACC < 1:28035882/46‑1 GCCGGACGGGTCATCCGCCTGCCCAGTGAAAACGGCAGCCACCCCACCTTCCGTTACGTTGTACTTG > 1:22971160/1‑67 GCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGA < 1:7335329/68‑1 GCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTG > 1:5543925/1‑67 CGGACGGGTCATCCGCCTGACCAGTGAGAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:10828432/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCCCCTTCCGTTACGATGTACTTGACC > 1:5515894/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCCCCTTCCGTTACGATGTACTTGACC > 1:26167670/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGCCC > 1:6110704/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGCCC > 1:10954655/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:18482401/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:4776373/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:18694052/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:9544289/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:27949480/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:8793313/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:28503303/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:21586414/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:6257986/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:5630944/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > 1:21466193/1‑68 CGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGAC < 1:13852225/67‑1 CTGCGCGTTAGCCCGCCCTGCGTGGTACGGACGGCCTTTCCCCACGCATCGTACTGTGTCCCGTTTCTGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3757443‑3757369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgccgGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACC > CP009273/3757464‑3757529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |