| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 406 (1.050) | 26 (0.080) | 11/96 | NT | 7.2% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 318 (0.960) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 102 total aligned reads displayed.
AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > CP009273/3999197‑3999262 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCA > 1:13147490/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCA > 1:7930086/1‑68 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:1669494/1‑68 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:6016375/1‑68 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:157720/1‑68 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:12849516/1‑68 gTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:20829503/2‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:26064185/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:4582132/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:1822684/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:14765899/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:28453830/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC < 1:22209140/67‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:1341706/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:13002525/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:23825296/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:7971518/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:23721346/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:26053303/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:12052966/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:24666990/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGC > 1:11037536/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCA < 1:5014194/65‑1 TTCAACACTTCCGCCTGCCCCCCATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCAATTTTCAGC > 1:24848255/1‑67 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCC < 1:7224979/68‑1 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCG > 1:15589469/1‑66 AACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT < 1:27262495/68‑1 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:19296268/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:30678806/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:3618702/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:10887028/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:17005227/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCT > 1:8027249/1‑67 CACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGT < 1:9062792/68‑1 CACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGT < 1:16837354/68‑1 ACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTT < 1:28749707/68‑1 CGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTAT < 1:1545551/68‑1 GCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTta < 1:6888202/68‑3 GCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAG < 1:7578357/68‑1 CACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:28431822/67‑1 cCATTCACCCCGATTCCCTGAAAT‑AAAAACCGCCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:27638729/67‑1 ACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:27111701/68‑1 ACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:8450802/68‑1 ACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:11983191/68‑1 aCACCCCGATAGCCTGAAAA‑AAACACAGGCGCTATTTTCAGCGCCTGTTATTATATCAGGCAATCGGG < 1:18727961/67‑1 TCACCCCGATTGCCTGAAAT‑AAAACCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:12398050/68‑1 TCACCCCGATTGCCTGAAAT‑AAAACCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:4338708/68‑1 TCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:2079739/68‑1 TCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:21379222/68‑1 TCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:11069099/68‑1 TCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:19240668/68‑1 TCACCCCGACAGCCGGAAAT‑AAAACCCGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:12884108/68‑1 CACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:29507520/68‑1 CCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGA < 1:27216277/68‑1 CCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGA < 1:2838936/68‑1 CCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTATCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGA < 1:29107338/68‑1 CCGATTGCCTGAAAT‑AAAACCAGGCGCTATTTTCCGCGCCTGTTTTTATTTCAGGCAAGCGGGGTGAA < 1:6842863/68‑1 CCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAA < 1:2592605/68‑1 CGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAGCGGGGTGAAT < 1:7211065/68‑1 AAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGA < 1:14732450/68‑1 accGGCGCTATTTTCCGCGCCTGTTTTTATTCCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG < 1:15224248/65‑1 ccGGCGCTATTTTCCGCGCCTGTTTTTATTTCAGGCAACCGGGGTGAATGTGGCGCAGGCGGAAGTGT < 1:1091273/66‑1 CAGCCGCTATTTGCAGCGCCGGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGT < 1:25587679/68‑1 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGGGTCCG > 1:23405057/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:8953757/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:3617328/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:20027116/1‑68 cCCTGTTTTAATTCCCGGCACGCGGGGTGAATGGGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:24657445/67‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:6199347/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:25161234/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:15540322/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:6943547/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:145465/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:14449552/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:13968778/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:12426387/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:12233169/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:12081368/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:11362406/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:8608994/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:10681119/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:2970774/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:26687001/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:10312151/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:28641694/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:18941259/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:334082/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:3637061/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:18334001/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGATGAATCTGGAGTCCGGA < 1:17982075/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGGGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:9055772/68‑1 CCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:17380324/1‑67 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:8755840/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:24199461/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAG < 1:18374927/67‑1 TGTTTTTATTTCAGGCAATCTGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:21867679/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > 1:16203344/1‑68 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:19842252/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:21867671/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > 1:162871/1‑68 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAAT‑AAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > CP009273/3999197‑3999262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |