| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 406 (1.050) | 26 (0.080) | 11/96 | NT | 7.2% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 318 (0.960) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 528 total aligned reads displayed.
TGGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999108‑3999241 | gCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAg > 1:7157793/1‑68 (MQ=255) ctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAg < 1:18374927‑M1/3‑1 (MQ=255) tccggactccagattcatcacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:17982075‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:28641694‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:13968778‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:145465‑M1/5‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAgg < 1:25169488/67‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc > 1:16236354/1‑68 (MQ=255) aaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc > 1:26862014/1‑67 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:18910589/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:27936180/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:7739777/68‑1 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg > 1:6336701/1‑68 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg > 1:21119679/1‑68 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg < 1:26410668/68‑1 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg < 1:9088414/68‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:27216902/67‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:8848611/67‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:924603/67‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaaa < 1:5261002/67‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaaa < 1:15274588/67‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAAt > 1:15553471/1‑68 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAAt > 1:4830040/1‑68 (MQ=255) tCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATa < 1:27052703/68‑1 (MQ=255) tCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGGTTCTCGCGCAGGCGCTGAAAATa > 1:21756443/1‑68 (MQ=255) aGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgc > 1:1428762/1‑67 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:27734858/1‑65 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:24560404/1‑65 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:22347205/1‑65 (MQ=255) aTCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAgcg > 1:19936614/1‑65 (MQ=255) acacttccgcctgcgccacattcaccccggttgcctgaaataaaaaCAGGCGCGGAAAATAGcgccgg < 1:1091273‑M1/22‑3 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:10005024/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:5415308/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:9371969/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:19610470/68‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:6565180/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:5777836/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:25967439/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:16869091/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:8285615/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:30609065/1‑68 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:6904014/68‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:7505211/68‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:2374464/68‑1 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:29681103/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:10440260/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:1200168/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:20856296/1‑68 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:30196263/68‑1 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:21522928/68‑1 (MQ=255) cAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:20042244/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGGCTGTTTTTATTTCAGGCaa > 1:3724697/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:20714818/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:23032328/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCCCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:4125024/1‑67 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:29449482/1‑68 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:13610555/1‑68 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:27508428/1‑68 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:18692987/1‑68 (MQ=255) ttcaccccgcttgcctgaaataaaaaCAGGCGCGGAAAATAGCGCCTGGTTTTATTTCAGGCAATCgg < 1:6842863‑M1/42‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:13040149/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:19400716/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:1218033/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:22121503/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:29803414/65‑1 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:9606120/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:8521702/1‑68 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:17264617/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:16649420/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:869905/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:1607874/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:4479252/67‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGGTTTTATTTCAGGCAATCGGGGTGa < 1:12398050‑M1/47‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGGTTTTATTTCAGGCAATCGGGGTGa < 1:4338708‑M1/47‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:28781156/68‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:29085309/68‑1 (MQ=255) aaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGaa < 1:25774449/68‑1 (MQ=255) aaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGaa < 1:28135608/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:3450117/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:24991341/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:1138655/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:19021416/1‑68 (MQ=255) cATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgt > 1:17630340/1‑68 (MQ=255) tgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgtg < 1:28431822‑M1/52‑1 (MQ=255) tGCAGTTTCTCGCTCAGGCTCTGAAAATATCGCCTGTTTTTATTTCAGGCAATCTGGGTGAATGTGgc < 1:11140934/68‑1 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:23482799/1‑68 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGGGCAgg < 1:31104063/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:6997660/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:25562629/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:3223576/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:12769459/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:22661464/68‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:612023/68‑1 (MQ=255) tcGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGa < 1:15020491/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:15411994/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:31870163/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgt < 1:21883885/67‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgt < 1:23906969/67‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgt < 1:24309692/67‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgt < 1:31453590/67‑1 (MQ=255) | TGGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999108‑3999241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |