| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4501871 = | 270 (0.700) | 26 (0.080) | 9/92 | NT | 6.8% | coding (361/957 nt) | fecD | iron‑dicitrate transporter subunit |
| ? | CP009273 | 4501966 = | 494 (1.560) | coding (266/957 nt) | fecD | iron‑dicitrate transporter subunit | |||||
Only 100 of 385 total aligned reads displayed.
ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 | ggcgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaacc < 1:31918862‑M1/2‑1 (MQ=255) gCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCa > 1:26847183/1‑68 (MQ=255) gCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCa > 1:8695977/1‑68 (MQ=255) cgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCa > 1:13107885‑M1/65‑67 (MQ=255) ccGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCAt > 1:30810824/1‑68 (MQ=255) tGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgcc > 1:22591100/1‑67 (MQ=255) tGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgcc > 1:15536460/1‑67 (MQ=255) cgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCATgcc < 1:27807992‑M1/7‑1 (MQ=255) cgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCATgcc > 1:14531028‑M1/61‑67 (MQ=255) gAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgccgc < 1:9395246/68‑1 (MQ=255) gAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgccg < 1:25588212/67‑1 (MQ=255) gAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgccg > 1:2061328/1‑67 (MQ=255) gAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgccg > 1:17721498/1‑67 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc > 1:17486937/1‑68 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc > 1:14627453/1‑68 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc > 1:8924302/1‑68 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc > 1:17175486/1‑68 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccg < 1:4308837/67‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgccc < 1:18471800/66‑1 (MQ=255) ccAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCa > 1:14298458/1‑68 (MQ=255) cTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAg > 1:15693350/1‑67 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:30209846/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:9760459/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:28857620/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:29702262/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:18255054/67‑1 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:14833344/67‑1 (MQ=255) aTCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCTACCCCGCCATGCCGCCCGCAAAGGCcag < 1:26752469/68‑1 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:25663510/1‑67 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:20726523/1‑67 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg < 1:26560925/67‑1 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg > 1:27154153/1‑67 (MQ=255) tggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgca > 1:6111860/1‑67 (MQ=255) ggTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgcagc > 1:10893385/1‑67 (MQ=255) gTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgcagca > 1:13833414/1‑67 (MQ=255) cTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCa > 1:7275592/1‑68 (MQ=255) cTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCa > 1:21418388/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:5615447/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:28468034/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:29983397/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:15937491/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:3413230/1‑68 (MQ=255) catcaccggatattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACgg < 1:12005057‑M1/42‑1 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:7770443/1‑68 (MQ=255) aTCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACggg < 1:204395/65‑1 (MQ=255) aTCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACggg < 1:22048749/65‑1 (MQ=255) aTCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACggg < 1:17978168/65‑1 (MQ=255) aTCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAg > 1:19189866/1‑68 (MQ=255) tCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGt > 1:27428797/1‑68 (MQ=255) cTTCAGCAATATAAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTg > 1:17332098/1‑68 (MQ=255) ttCAGCAAAATCACCCCCGCCAAGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGa < 1:8147382/68‑1 (MQ=255) cAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:18929964/68‑1 (MQ=255) cAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:23563379/68‑1 (MQ=255) cAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg > 1:2116760/1‑68 (MQ=255) gCAATATCACCCCCGCCAAGCCGCCGGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGGGACg > 1:3813933/1‑66 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:23466528/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:6366238/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:11323203/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:24476513/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:23043804/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:22462387/1‑68 (MQ=255) attctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCCCCATCACGGGCAGTGCCGGCa < 1:31698736‑M1/54‑1 (MQ=255) aaTGTCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc < 1:20185805/66‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACgg < 1:19661825/65‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc < 1:2291698/66‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:12964914/1‑68 (MQ=255) atatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATa > 1:29102234/1‑68 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaa < 1:4997205/68‑1 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaa < 1:1645348/68‑1 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaa < 1:12636493/68‑1 (MQ=255) tcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag < 1:10506626‑M1/58‑1 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCTTaag > 1:2323545/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:28614354/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:4494151/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:30554075/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:30907426/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:1674906/1‑68 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:25942499/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:11646290/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:28241642/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:21576767/68‑1 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:13544364/1‑68 (MQ=255) cAACACCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGCCGGCATaagaa > 1:785514/1‑68 (MQ=255) aaCCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaag > 1:32091176/1‑68 (MQ=255) tgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATTACGGGCAGTGACGGCATAAGAAGt < 1:24602129‑M1/62‑1 (MQ=255) tgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAGAAGAAGt < 1:15831961‑M1/62‑1 (MQ=255) aCCCCGCCATGCCGCCCGCAAAGGCCAGCAGCCGCGGGACGATGCCGCGGAGAGACGCCATgagaact > 1:10376844/1‑66 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCCTCCCGGGCAGTGACGGCATAAGAAGTa > 1:25152700/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:15167569/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:22890323/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:3771849/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:10007001/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:12470391/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:11004313/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGCCGGCATAAGAAGTag > 1:30409371/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:668704/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:31300739/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:24068455/1‑68 (MQ=255) ccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTaga > 1:1407472/1‑68 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGCCGGCATAAGAAGTagag > 1:4193031/1‑67 (MQ=255) | ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |