| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 447701 = | 337 (0.880) | 17 (0.050) | 9/96 | NT | 6.0% | coding (1301/1476 nt) | ampG | muropeptide transporter |
| ? | CP009273 | 447798 = | 246 (0.750) | coding (1204/1476 nt) | ampG | muropeptide transporter | |||||
Only 100 of 408 total aligned reads displayed.
AAGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCAT > CP009273/447635‑447767 | ctggtcgacattctatctattctccgtcgccgctgccgtaccagggcttattttgctgctggtttgc > 1:30049420‑M1/66‑67 (MQ=255) aGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGAcgcccgcc > 1:31900490/1‑68 (MQ=255) aGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGAcgcccgcc > 1:171625/1‑68 (MQ=255) aGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGAcgcccgcc > 1:15797418/1‑68 (MQ=255) aGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGAcgcccgcc > 1:132525/1‑68 (MQ=255) aGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGAcgcccgcc > 1:10995012/1‑68 (MQ=255) gTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAg < 1:23079237/68‑1 (MQ=255) gTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAg > 1:22759473/1‑68 (MQ=255) gTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAg < 1:25078966/68‑1 (MQ=255) gTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAg < 1:14141985/68‑1 (MQ=255) gTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAg > 1:1451703/1‑68 (MQ=255) cAAATCCAGCGGGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAgt < 1:8008915/67‑1 (MQ=255) cAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAgtg < 1:4847208/68‑1 (MQ=255) cAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAgt < 1:26060103/67‑1 (MQ=255) cAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAgt < 1:26378552/67‑1 (MQ=255) aaaTCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAgtgt < 1:22347393/68‑1 (MQ=255) aTCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTcc < 1:10692443/68‑1 (MQ=255) aTCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTc > 1:19131843/1‑67 (MQ=255) tCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTcc > 1:18272725/1‑67 (MQ=255) ccAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCcac > 1:29023742/1‑68 (MQ=255) ccAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCcac > 1:2112876/1‑68 (MQ=255) ccAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCcac > 1:1227389/1‑68 (MQ=255) cgcgTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATg > 1:26203134/1‑67 (MQ=255) gcgTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATg < 1:1399397/66‑1 (MQ=255) gcgTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATg < 1:21018432/66‑1 (MQ=255) gcgTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATg < 1:104202/66‑1 (MQ=255) gcgTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGc > 1:30459256/1‑68 (MQ=255) ccATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAg < 1:16602955/68‑1 (MQ=255) cATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAgg < 1:24437710/68‑1 (MQ=255) cATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAgg < 1:18898687/68‑1 (MQ=255) cATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAgg < 1:26791176/68‑1 (MQ=255) cATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAgg < 1:21214020/68‑1 (MQ=255) tCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATa > 1:28320828/1‑67 (MQ=255) tCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATa > 1:8340844/1‑67 (MQ=255) aaTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGGCCCCAGTGTCCACATGGCAAAGGCATAAcc < 1:19579828/68‑1 (MQ=255) aaTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAAcc < 1:24683014/68‑1 (MQ=255) aaTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAAcc < 1:16073508/68‑1 (MQ=255) aTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATaa > 1:31118238/1‑65 (MQ=255) aTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCt < 1:30815057/68‑1 (MQ=255) aTAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCt < 1:13005321/68‑1 (MQ=255) aGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTg > 1:3357961/1‑67 (MQ=255) aGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTg > 1:15508997/1‑67 (MQ=255) gCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAACGGCATAACCTGcc > 1:11937849/1‑68 (MQ=255) gCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGcc > 1:565278/1‑68 (MQ=255) gCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGcc > 1:25477703/1‑68 (MQ=255) gCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGcc > 1:19446392/1‑68 (MQ=255) gCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGcc > 1:8482951/1‑68 (MQ=255) aGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCgg > 1:5511772/1‑68 (MQ=255) aGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCgg > 1:22084400/1‑68 (MQ=255) aGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGGCCACATGGCAAAGGCATAACCTGCCgg > 1:351045/1‑68 (MQ=255) aaCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGata > 1:2329650/1‑68 (MQ=255) aaCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGata > 1:29213145/1‑68 (MQ=255) aaCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGata > 1:24275038/1‑68 (MQ=255) aaCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGat < 1:2394540/67‑1 (MQ=255) aaCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGa < 1:21867915/66‑1 (MQ=255) aCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat < 1:25841318/68‑1 (MQ=255) aCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:11099136/1‑68 (MQ=255) aCCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat < 1:28484852/68‑1 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:17710087/1‑67 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:21348166/1‑67 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:17958847/1‑67 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:13689530/1‑67 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:6433241/1‑67 (MQ=255) ccACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGatat > 1:19322024/1‑67 (MQ=255) cagggcttattttgctgctggtttGCCGCCAGGGTCCACATGGCCAAGGCATAACCTGCCGGGTAtgg < 1:9176511‑M1/44‑2 (MQ=255) acacGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCg > 1:15451783/1‑68 (MQ=255) acacGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCg < 1:7273608/68‑1 (MQ=255) acGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGt < 1:6868109/68‑1 (MQ=255) acGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGt > 1:1870914/1‑68 (MQ=255) acGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGt < 1:27449820/68‑1 (MQ=255) acGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGt < 1:24062856/68‑1 (MQ=255) acGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGt < 1:31481510/68‑1 (MQ=255) gCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACg > 1:7422178/1‑68 (MQ=255) gCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACg > 1:14358787/1‑68 (MQ=255) gCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACg > 1:4509139/1‑68 (MQ=255) gCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACg > 1:15174114/1‑68 (MQ=255) cAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACggg < 1:5948430/68‑1 (MQ=255) aaCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGga < 1:14807686/68‑1 (MQ=255) aaCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGga < 1:10134069/68‑1 (MQ=255) aaCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGga < 1:31775084/68‑1 (MQ=255) aaCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGga < 1:21775711/68‑1 (MQ=255) aaCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGga < 1:27107314/68‑1 (MQ=255) aCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGgag < 1:5151972/68‑1 (MQ=255) aCAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGgag < 1:12749459/68‑1 (MQ=255) aGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGAt > 1:29411142/1‑68 (MQ=255) ggCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATa > 1:17554970/1‑68 (MQ=255) ggCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATa > 1:8868636/1‑68 (MQ=255) ggCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATa > 1:20260579/1‑68 (MQ=255) ggCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATa > 1:7746397/1‑68 (MQ=255) gctgctggtttGCCGCCAGTGTCCCCATGGCAAAGGCATAACCTGCCGGATATGCGGTTCGGGAGATa < 1:13842630‑M1/57‑1 (MQ=255) gCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATaa > 1:27754091/1‑68 (MQ=255) gCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATaa > 1:7000003/1‑68 (MQ=255) tgctggtttGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTGCGGGAGATaaa < 1:11637672‑M1/59‑1 (MQ=255) cTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGAt < 1:29748019/65‑1 (MQ=255) cTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATaaa > 1:9327004/1‑68 (MQ=255) aCGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGtt > 1:30319545/1‑68 (MQ=255) gcccgccGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTg > 1:18481589/1‑67 (MQ=255) tttGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTGTc < 1:20770116‑M1/65‑1 (MQ=255) cccgccGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTGTc > 1:3797203/1‑68 (MQ=255) ccgccgCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCa < 1:17332792/68‑1 (MQ=255) | AAGTGCGTCAAATCCAGCGCGTCCATCGTCAATAGCAGTAACCACACGGCCAACAGGCTGACGCCCGCCGCCAGTGTCCACATGGCAAAGGCATAACCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCAT > CP009273/447635‑447767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |