| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 447701 = | 337 (0.880) | 17 (0.050) | 9/96 | NT | 6.0% | coding (1301/1476 nt) | ampG | muropeptide transporter |
| ? | CP009273 | 447798 = | 246 (0.750) | coding (1204/1476 nt) | ampG | muropeptide transporter | |||||
Only 100 of 351 total aligned reads displayed.
CCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAGC > CP009273/447731‑447863 | ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:21014911/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa < 1:17742460/68‑1 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:17499439/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:8289255/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:4567749/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:26354100/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:2696754/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:14196101/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:13746135/1‑68 (MQ=255) tGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCaaa < 1:11373645/68‑1 (MQ=255) gacaactttatctcccgtaccgcatatccggcaggttatgcctttgccatgtggacactggcggcaaa < 1:20770116‑M2/3‑1 (MQ=255) aactttatctcccgtaccgcatatccggcaggttatgcctttgccatgtggacactggcggcAAACca < 1:25631018‑M2/6‑1 (MQ=255) gATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACcagc > 1:4140298/1‑68 (MQ=255) tatGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACcagca < 1:6081261/67‑1 (MQ=255) tatGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACcagca < 1:31966154/67‑1 (MQ=255) tatctcccgtaccgcatatccggcaggttatgcctttgtcatgtggacactggcggcAAACCagcagc < 1:18819781‑M2/11‑1 (MQ=255) atGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCagcagc < 1:21939286/68‑1 (MQ=255) tGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAgcagca > 1:3284675/1‑68 (MQ=255) tGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCATCTGGCGGCAAACCAgcagca > 1:14344961/1‑68 (MQ=255) gCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaa < 1:543208/68‑1 (MQ=255) gCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaa < 1:30407300/68‑1 (MQ=255) gCGGTACGGGAGATAAAGTGGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaa < 1:8001679/68‑1 (MQ=255) cGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa > 1:24792485/1‑68 (MQ=255) cGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa > 1:18443914/1‑68 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa > 1:14052736/1‑68 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa < 1:15394708/68‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa < 1:12699610/68‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa > 1:11973514/1‑68 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:29963095/67‑1 (MQ=255) gTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAAt > 1:27110268/1‑68 (MQ=255) aCGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATaa > 1:30003661/1‑68 (MQ=255) gtaccgcatatccggcccgttatgccattgccatggcgacactggcggcAAACCAGCAGCAAAATAAg < 1:10460724‑M2/19‑1 (MQ=255) gggAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAg > 1:26012512/1‑67 (MQ=255) gggAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc < 1:1928135/68‑1 (MQ=255) ggAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:7460954/1‑67 (MQ=255) gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGcc < 1:28994670/67‑1 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:18255902/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:16927411/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:28600703/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:5827463/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:31209727/1‑65 (MQ=255) gaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCt < 1:10030892/67‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTg < 1:15827984/66‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGt < 1:2290016/68‑1 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:170158/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:11133856/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:29643364/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:18632633/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:7170195/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:1970921/1‑68 (MQ=255) aGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:12349109/1‑68 (MQ=255) aGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:13297788/1‑68 (MQ=255) aGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:13560826/1‑68 (MQ=255) gatGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACgg > 1:28433573/3‑68 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:29408306/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:16389224/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:30573751/1‑67 (MQ=255) gTTGTCATATACTCGTGTATATTCAAGCGTCTGGCGGCAAACCATCACCAAAATAAGCCCTGGTACg > 1:5521620/1‑67 (MQ=255) tGTCATTTACTCGTGTATATTCAAGCGTCTGTCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCa > 1:1475949/1‑68 (MQ=255) ttACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAgcggcg > 1:20137025/1‑68 (MQ=255) aCTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGAc > 1:23404291/1‑68 (MQ=255) aCTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGAc > 1:4386440/1‑68 (MQ=255) aCTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGAc > 1:30820392/1‑68 (MQ=255) cTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACg > 1:5232979/1‑68 (MQ=255) tCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACgg > 1:14500754/1‑68 (MQ=255) cGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGga > 1:968309/1‑68 (MQ=255) cGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGga > 1:25970647/1‑68 (MQ=255) gaatatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGgaga < 1:22413084/65‑1 (MQ=255) atatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAata > 1:23810582/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:6940825/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:8811402/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:2670958/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:6352041/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTTAGGAAGCGGCGAAGGAGAatagat > 1:16081193/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:10140619/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:19070135/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:24094513/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:25446019/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCTACGGAGAatagata > 1:5106348/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:22551075/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:10565071/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:15065584/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:21261076/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:4846387/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:27542776/1‑68 (MQ=255) tCAAGCCTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:277367/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:24863424/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:28062324/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:10974053/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:3422291/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:19575843/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:6196740/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:2432275/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGACAATAGATAGaa > 1:20729304/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:20287032/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:3864367/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:11641472/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:3187405/1‑68 (MQ=255) gTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:21513605/1‑67 (MQ=255) gcAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAg > 1:9189809‑M2/3‑67 (MQ=255) | CCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAGC > CP009273/447731‑447863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |